Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC010493.1-201ENST00000513479 292 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 RN7SKP244-201ENST00000516513 307 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP3Q9Y446 AL133271.1-201ENST00000538229 291 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP3Q9Y446 AL121603.1-201ENST00000553815 142 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP3Q9Y446 RN7SL703P-201ENST00000578485 302 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 MIR5685-201ENST00000579080 79 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 MTATP6P3-201ENST00000581686 676 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 AP001429.1-201ENST00000602568 530 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 MIR98-201ENST00000606724 119 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 AC126118.1-201ENST00000607744 628 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP3Q9Y446 AL592295.2-201ENST00000612578 206 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 AL158209.2-201ENST00000619266 216 ntBASIC3.8□□□□□ -1.8
PKP3Q9Y446 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PKP3Q9Y446 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP3Q9Y446 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP3Q9Y446 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP3Q9Y446 RNA5SP515-201ENST00000364570 118 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 RNU6-637P-201ENST00000384050 107 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 SNORA57.1-201ENST00000391227 145 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 MTND3P17-201ENST00000416968 344 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC244098.2-201ENST00000422068 99 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC133104.1-201ENST00000429100 218 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC006480.1-201ENST00000449887 378 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC093392.2-201ENST00000450682 337 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC007967.1-201ENST00000455422 1159 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 C1DP4-201ENST00000455429 424 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 MTCO2P29-201ENST00000465212 189 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC126182.1-201ENST00000478134 357 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 TRBV12-2-201ENST00000489763 344 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC020893.1-201ENST00000502452 580 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AF213884.2-201ENST00000510417 903 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP3Q9Y446 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PKP3Q9Y446 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 uc_338.12-201ENST00000616344 181 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 AC091905.1-201ENST00000624400 311 ntBASIC3.79□□□□□ -1.8
PKP3Q9Y446 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP3Q9Y446 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP3Q9Y446 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP3Q9Y446 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP3Q9Y446 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PKP3Q9Y446 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 RNU4-1-201ENST00000363925 141 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 RNU6-432P-201ENST00000384196 109 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC099677.1-201ENST00000420575 175 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 ISCA1P1-201ENST00000426679 387 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 AL591419.1-201ENST00000427423 339 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 RPL35AP22-201ENST00000436855 335 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AL451074.3-201ENST00000437709 472 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AL121871.1-201ENST00000443413 436 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 RNU7-59P-201ENST00000459101 61 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 RPL7P23-201ENST00000493874 747 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC146944.2-203ENST00000502493 354 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 HMGB1P29-201ENST00000505659 499 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC020593.1-201ENST00000507399 299 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 RAC1P2-201ENST00000511164 579 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC139495.1-202ENST00000513164 354 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.78□□□□□ -1.8
PKP3Q9Y446 AC026801.2-201ENST00000515352 425 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 RN7SKP209-201ENST00000516888 304 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 RNU6-352P-201ENST00000516908 107 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 NARSP2-201ENST00000518524 679 ntBASIC3.78□□□□□ -1.8
PKP3Q9Y446 HMGN1P28-201ENST00000521340 364 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms