Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 Y_RNA.1-201ENST00000352915 104 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 MIR195-201ENST00000385194 87 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 PMCHL1-202ENST00000423102 261 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 CYCSP4-201ENST00000429682 331 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 GTF2IP20-201ENST00000431663 360 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 RPL36AP13-201ENST00000457490 317 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AC026412.2-201ENST00000512270 1075 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 RNU6-583P-201ENST00000516012 92 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 DEFB131D-201ENST00000526803 184 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AC022878.1-201ENST00000530684 149 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AC100770.1-201ENST00000532310 322 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AC063950.1-201ENST00000552036 308 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 VN1R84P-201ENST00000593697 235 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 MIR7973-1-201ENST00000614683 76 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 Z69720.2-201ENST00000624755 279 ntBASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL17A1Q9UMD9 RN7SKP222-201ENST00000410651 315 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 AC073264.1-201ENST00000411508 416 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 RPS3AP3-201ENST00000411933 242 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 RPL23AP25-201ENST00000430973 463 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 RPS24P8-201ENST00000431490 402 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 MTND6P18-201ENST00000439477 513 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 AC015724.1-201ENST00000478577 156 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 AC104564.1-201ENST00000493028 407 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 COX6B1P6-201ENST00000522347 255 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 AC109635.4-202ENST00000531666 412 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 DPPA3P3-201ENST00000603842 430 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 GDI2P1-201ENST00000429312 1336 ntBASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.96□□□□□ -1.45
COL17A1Q9UMD9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AL133383.2-201ENST00000622958 2336 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 Y_RNA.184-201ENST00000363884 108 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 MIR506-201ENST00000384998 124 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AL136131.1-201ENST00000406079 803 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 MIR1251-201ENST00000408552 70 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 MTCYBP10-201ENST00000424905 650 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AL606753.1-201ENST00000427435 87 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AL669831.1-202ENST00000428504 417 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 FCF1P1-201ENST00000432690 571 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 PGBD4P3-201ENST00000440731 581 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 SLC31A1P1-201ENST00000451221 567 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 APOOP2-201ENST00000461561 539 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AC020893.1-201ENST00000502452 580 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 MRPS35P2-201ENST00000508242 191 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AC112206.3-201ENST00000514578 389 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 RNU6-255P-201ENST00000516957 105 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 IGKV2-38-201ENST00000517443 247 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 PTP4A1P6-201ENST00000531034 478 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 MIR3910-1-201ENST00000580936 111 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AL162413.1-201ENST00000603198 110 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AC112191.3-201ENST00000604371 277 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 FAM157A-202ENST00000615155 405 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 AC100810.6-201ENST00000638068 285 ntBASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL17A1Q9UMD9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 OR52B1P-201ENST00000316506 909 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 RNY3P3-201ENST00000363816 102 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 RNU6-115P-201ENST00000364310 107 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 RNU6-26P-201ENST00000383985 107 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 RNU6-301P-201ENST00000384277 107 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 U8.14-201ENST00000390843 143 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms