Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 TRAV32-201ENST00000553993 340 ntBASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 MRPS21P7-201ENST00000566937 238 ntBASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 CPDP1-201ENST00000579660 283 ntBASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 AC006065.5-201ENST00000623427 349 ntBASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 AC100757.1-201ENST00000616872 1835 ntBASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 AL078621.3-201ENST00000623707 2042 ntBASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
FOXD3Q9UJU5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC025031.4-201ENST00000621248 3271 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 SNORA70-201ENST00000384436 135 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 Y_RNA.552-201ENST00000384665 112 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 MIR625-201ENST00000385047 85 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AL591034.2-201ENST00000402839 359 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC083899.1-201ENST00000454465 3819 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 RNU6-1037P-201ENST00000459571 107 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 RN7SL172P-201ENST00000460535 303 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC108860.1-201ENST00000484521 383 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC110792.1-201ENST00000491826 472 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 HMGN1P11-201ENST00000508668 303 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 CBX3P8-201ENST00000532412 525 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC002545.1-201ENST00000592511 181 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC098826.3-201ENST00000603823 466 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 HMGB1P24-202ENST00000615653 685 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 MIR6719-201ENST00000622428 87 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC132068.1-201ENST00000623805 459 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 OR4F13P-202ENST00000560066 2054 ntBASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXD3Q9UJU5 PABPC1P6-201ENST00000445594 1829 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 Y_RNA.33-201ENST00000362591 102 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 RNU4-44P-201ENST00000363050 141 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 RNU6-1167P-201ENST00000363227 94 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 Y_RNA.447-201ENST00000384184 113 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 Y_RNA.551-201ENST00000384661 102 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 LAP3P1-201ENST00000403648 294 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AP000580.1-201ENST00000404439 358 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AL513475.1-201ENST00000406602 315 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AL096701.2-201ENST00000416920 238 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 MTCO3P8-201ENST00000453691 755 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AC092324.1-201ENST00000468671 324 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 RN7SL447P-201ENST00000494711 245 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 GLUD1P3-202ENST00000508551 200 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AC107222.1-201ENST00000510899 637 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 RNU1-86P-201ENST00000516108 154 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 RNU6-1143P-201ENST00000516125 104 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 RNU1-107P-201ENST00000516617 154 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 RNA5SP471-201ENST00000516971 106 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AC144568.1-201ENST00000520139 137 ntBASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXD3Q9UJU5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms