Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AL391684.1-202ENST00000641293 1636 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC114947.2-201ENST00000565748 2125 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AL391987.6-201ENST00000305671 199 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 Y_RNA.84-201ENST00000363011 104 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 RNU6-338P-201ENST00000383888 105 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 MYL8P-204ENST00000431574 518 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 PSMD10P3-201ENST00000437000 448 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC104332.1-201ENST00000440471 797 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 RN7SL570P-201ENST00000484405 292 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 RNU4-71P-201ENST00000516258 113 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC022868.1-201ENST00000517767 391 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 MIR4436B2-201ENST00000581415 91 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 MIR4436B1-201ENST00000583272 91 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 MIR4420-201ENST00000583944 77 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AC002545.1-201ENST00000592511 181 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AL162431.4-201ENST00000604674 411 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AP001282.2-201ENST00000616149 309 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 AL353748.2-201ENST00000622148 471 ntBASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
LIMD1Q9UGP4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AP000560.1-201ENST00000624150 1937 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 RNU5A-1-201ENST00000362698 116 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 RNU6-280P-201ENST00000364145 104 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 RPL21P38-201ENST00000418090 167 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 TOMM20P4-201ENST00000427861 435 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AC009963.2-201ENST00000453431 138 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 snoU13.29-201ENST00000459370 104 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AL035690.1-201ENST00000490892 383 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 IGKV2-23-201ENST00000518729 323 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 PRPF19P1-201ENST00000584766 898 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 AL359955.1-201ENST00000455242 3275 ntBASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMD1Q9UGP4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AC004656.1-201ENST00000568479 4951 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 SNORD81.1-201ENST00000363064 77 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 RNY1-201ENST00000364228 113 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 Y_RNA.270-201ENST00000364693 104 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AC015977.1-201ENST00000418887 292 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 SDAD1P3-201ENST00000427380 333 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AL513124.1-201ENST00000450410 614 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 RN7SKP210-201ENST00000459176 261 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 RPS23P5-201ENST00000495419 428 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AC026784.1-201ENST00000507986 352 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AC074250.1-201ENST00000511117 192 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AC067942.3-201ENST00000512025 362 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 MIR2117-201ENST00000516780 80 ntBASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.9□□□□□ -1.46
LIMD1Q9UGP4 AC022968.1-201ENST00000567372 442 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms