Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 SNORD116.3-201ENST00000517176 78 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 DYNLL1P4-201ENST00000549314 266 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 RPL23AP84-201ENST00000571193 464 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 MIR6130-201ENST00000619419 109 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTN3Q9P232 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTN3Q9P232 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTN3Q9P232 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC005592.1-201ENST00000566527 1640 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AL158163.1-201ENST00000603915 1649 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNTN3Q9P232 SNORA70E-201ENST00000384492 135 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 CYB5AP4-201ENST00000396692 399 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 NDUFS5P1-201ENST00000405668 289 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 HMGB1P12-201ENST00000438594 598 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AL772161.1-201ENST00000439130 476 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 RPS17P2-201ENST00000461663 408 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 HMGB1P25-201ENST00000468402 607 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC104472.2-201ENST00000469035 601 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC010631.1-201ENST00000474150 156 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 COX6B1P2-201ENST00000489624 230 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 RNU6-635P-201ENST00000516651 102 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 RNU6-1332P-201ENST00000516666 104 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 RNU6-699P-201ENST00000517081 110 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 RNU6-323P-201ENST00000521915 107 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTN3Q9P232 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC009852.2-201ENST00000567898 485 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC113195.1-201ENST00000579952 141 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 MIR4480-201ENST00000582492 71 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 AL669831.4-202ENST00000590817 238 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC100812.1-201ENST00000607622 580 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AL359547.2-201ENST00000615810 418 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 AC073869.10-201ENST00000642016 354 ntBASIC5.38□□□□□ -1.55
CNTN3Q9P232 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTN3Q9P232 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNTN3Q9P232 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CNTN3Q9P232 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 RNU6-715P-201ENST00000365204 103 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNTN3Q9P232 RNU6-214P-201ENST00000384130 107 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 RPL21P67-201ENST00000402896 478 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 RNU6-293P-201ENST00000411259 106 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 Z99755.1-201ENST00000414048 380 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 RPS23P10-201ENST00000416185 486 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 USMG5P1-201ENST00000425964 177 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AC006466.1-201ENST00000438721 289 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 GAPDHP27-201ENST00000447427 1020 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 GSTA11P-201ENST00000452866 669 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AL691482.1-201ENST00000453255 87 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 SNORD5.1-201ENST00000458800 75 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AC110794.1-201ENST00000505816 425 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AC104136.1-201ENST00000512969 394 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AC087854.1-201ENST00000519706 414 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AC026371.1-201ENST00000551867 419 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 MIR4737-201ENST00000583979 81 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AC005899.2-201ENST00000584353 90 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.37□□□□□ -1.55
CNTN3Q9P232 NUTF2P8-201ENST00000604593 363 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 AL158032.1-201ENST00000605401 106 ntBASIC5.37□□□□□ -1.55
CNTN3Q9P232 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms