Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SH3BP4Q9P0V3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SH3BP4Q9P0V3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SH3BP4Q9P0V3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SH3BP4Q9P0V3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.99□□□□□ -1.77
SH3BP4Q9P0V3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SH3BP4Q9P0V3 ZNF680P1-201ENST00000436625 1469 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC009902.3-201ENST00000606235 2172 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 Y_RNA.72-201ENST00000362894 103 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 RNA5SP447-201ENST00000363749 119 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 RNA5SP167-201ENST00000365461 116 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 SNORD82-201ENST00000365530 70 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 RNU6-74P-201ENST00000384235 107 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 Y_RNA.529-201ENST00000384586 119 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 RNU6-1011P-201ENST00000384668 107 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 CYB5AP4-201ENST00000396692 399 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 PDCL2P1-201ENST00000419302 352 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 RPS29P17-201ENST00000430795 166 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 RPL36AP53-201ENST00000432891 316 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC127537.2-201ENST00000439258 465 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 CACYBPP2-201ENST00000453625 678 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 RNU6-261P-201ENST00000459506 102 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC021382.1-201ENST00000483523 359 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 PCBP2P3-201ENST00000509726 843 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 SCARNA24.1-201ENST00000516465 137 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 OR4P1P-201ENST00000530808 1136 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AP000907.2-201ENST00000530827 353 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 ARL2BPP2-201ENST00000550907 489 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC060771.1-201ENST00000582031 164 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC044792.1-201ENST00000593294 196 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC012603.1-201ENST00000606424 528 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AL136221.1-201ENST00000621449 509 ntBASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.98□□□□□ -1.77
SH3BP4Q9P0V3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AC018555.1-201ENST00000567548 1980 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 RPL7P26-201ENST00000333817 754 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 RNU4-73P-201ENST00000363164 141 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 RNU6-1097P-201ENST00000363586 107 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 XGY1-201ENST00000381172 446 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 MIR192-201ENST00000384915 110 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 MIR1-2-201ENST00000384961 85 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 U3.20-201ENST00000390909 217 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 U3.29-201ENST00000391296 212 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AL354719.1-201ENST00000406535 843 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 GPR143P-201ENST00000434155 205 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 RPL23AP46-201ENST00000438548 490 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 RPL7P52-201ENST00000449200 742 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AL353691.1-201ENST00000451332 387 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 NANOGP10-201ENST00000453325 895 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 snoU13.1-201ENST00000459157 104 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 RPL23AP41-201ENST00000484754 458 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 RPS3AP50-201ENST00000487064 803 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AC020893.1-201ENST00000502452 580 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AC025554.1-201ENST00000505641 188 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AC010486.1-201ENST00000511793 424 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 RNA5SP49-201ENST00000516450 115 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 OR4T1P-201ENST00000554933 911 ntBASIC3.97□□□□□ -1.77
SH3BP4Q9P0V3 TVP23BP1-201ENST00000557500 617 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms