Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AL049780.3-201ENST00000624612 1583 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 RNU6-335P-201ENST00000364563 113 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 Y_RNA.554-201ENST00000384672 102 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 RPS3AP3-201ENST00000411933 242 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 RPS7P15-201ENST00000415804 584 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC069157.1-201ENST00000421749 137 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 MTND4P25-201ENST00000441039 533 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 RPL7P36-201ENST00000444633 681 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 RANP8-201ENST00000444720 713 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 RPS17P13-201ENST00000448974 407 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC003071.1-201ENST00000451219 789 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 HMGN1P11-201ENST00000508668 303 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 NDUFB4P2-201ENST00000509515 391 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 RNU6-506P-201ENST00000516553 94 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 RNA5SP179-201ENST00000517284 121 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AL121603.1-201ENST00000553815 142 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AL161729.4-201ENST00000604650 476 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC090517.2-201ENST00000614966 680 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AL590099.1-201ENST00000615276 138 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 SEPT14P19-203ENST00000633205 211 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC244205.2-202ENST00000635781 342 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC092447.10-201ENST00000620607 1652 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 AC004520.1-201ENST00000608362 1413 ntBASIC3.86□□□□□ -1.79
NCKIPSDQ9NZQ3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 RNU1-18P-201ENST00000363062 164 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 RNA5SP235-201ENST00000365411 114 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 MIR30B-201ENST00000384850 88 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 RPS3AP36-201ENST00000398190 775 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 RPL30P2-201ENST00000414021 291 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 MTCO3P12-201ENST00000416718 547 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 UBE2V1P8-201ENST00000437166 265 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 MTND6P13-201ENST00000443510 523 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 PPIAP15-201ENST00000479662 484 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AC004924.1-201ENST00000480160 781 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 SNORA18.6-201ENST00000516792 115 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 CBX3P7-201ENST00000532876 502 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 CR383656.7-201ENST00000548164 174 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AC010928.3-201ENST00000587712 541 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 BNIP3P30-201ENST00000601184 574 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 XIAPP1-201ENST00000603162 600 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AC091167.4-201ENST00000605079 184 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AC019176.2-201ENST00000611579 315 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AP001506.1-201ENST00000615444 211 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AC084757.4-201ENST00000616350 526 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 U4.5-201ENST00000617137 123 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AL356585.4-201ENST00000623078 1229 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 AL157786.1-207ENST00000627771 695 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 CCT4P2-201ENST00000233836 1548 ntBASIC3.85□□□□□ -1.79
NCKIPSDQ9NZQ3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.84□□□□□ -1.79
NCKIPSDQ9NZQ3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NCKIPSDQ9NZQ3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NCKIPSDQ9NZQ3 SNORA71.3-201ENST00000362582 128 ntBASIC3.84□□□□□ -1.79
NCKIPSDQ9NZQ3 SNORD46.1-201ENST00000364139 104 ntBASIC3.84□□□□□ -1.79
NCKIPSDQ9NZQ3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.84□□□□□ -1.79
NCKIPSDQ9NZQ3 Y_RNA.248-201ENST00000364501 109 ntBASIC3.84□□□□□ -1.79
NCKIPSDQ9NZQ3 RNA5SP167-201ENST00000365461 116 ntBASIC3.84□□□□□ -1.79
NCKIPSDQ9NZQ3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms