Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNA5SP513-201ENST00000364648 118 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 RNU6-996P-201ENST00000365438 107 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 RNA5SP151-201ENST00000365632 117 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 RNU6-606P-201ENST00000384721 111 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 MIR514A2-201ENST00000385131 88 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 MIR514A3-201ENST00000385132 88 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 RPS20P14-201ENST00000412545 360 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 ERLEC1P1-201ENST00000433806 578 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 FAM103A2P-201ENST00000444122 354 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 PTMAP3-201ENST00000447474 330 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 snoU13.22-201ENST00000459428 104 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC022795.1-201ENST00000473808 480 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC010301.1-201ENST00000473936 355 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 MTCO1P29-201ENST00000496868 288 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 FAM206BP-201ENST00000510179 541 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 RNU1-45P-201ENST00000517191 141 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 SUMO2P20-201ENST00000520803 283 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AP005902.1-201ENST00000521358 186 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC107934.1-201ENST00000522215 217 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC090312.1-201ENST00000580637 348 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AL022345.1-201ENST00000607292 135 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AL021997.2-201ENST00000615674 271 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC022418.1-201ENST00000624118 445 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 Z69720.2-201ENST00000624755 279 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AC107068.1-201ENST00000563286 4218 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG3Q9NT62 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 AL049780.3-201ENST00000624612 1583 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG3Q9NT62 RNU6-379P-201ENST00000363813 104 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 MIR670-201ENST00000390142 98 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 MIR548I3-201ENST00000408378 149 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 MIR548I1-201ENST00000408810 149 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 RNU6-272P-201ENST00000411028 104 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 CYCSP19-201ENST00000411715 316 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 RPL36AP10-201ENST00000421785 322 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 GPR143P-201ENST00000434155 205 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 RPS24P6-201ENST00000452670 400 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 RPL35AP15-201ENST00000468042 339 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 RPL31P50-201ENST00000471002 296 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 RN7SL812P-201ENST00000493791 279 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 RNU6-714P-201ENST00000516963 103 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 RN7SKP295-201ENST00000517264 153 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 RPL7P20-201ENST00000520308 745 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG3Q9NT62 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 NF1P5-201ENST00000588287 448 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 CYP2C61P-201ENST00000604072 290 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ATG3Q9NT62 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ATG3Q9NT62 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.59□□□□□ -1.51
ATG3Q9NT62 NEAT1-202ENST00000501122 22743 ntBASIC5.59□□□□□ -1.51
ATG3Q9NT62 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG3Q9NT62 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms