Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MTCO3P20-201ENST00000454926 688 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RPL7L1P8-201ENST00000469911 741 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AL049830.2-201ENST00000480072 201 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RPS4XP13-201ENST00000483219 789 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 MTND1P3-201ENST00000484956 952 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RPS15AP36-201ENST00000492022 382 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 NDUFB4P2-201ENST00000509515 391 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC109464.2-201ENST00000510242 943 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RNA5SP315-201ENST00000516340 116 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 RNA5SP312-201ENST00000517068 116 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC137800.2-201ENST00000574375 120 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC103987.3-201ENST00000582071 292 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC006116.10-201ENST00000591836 581 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AL109618.2-201ENST00000605527 211 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AL391261.4-201ENST00000616012 481 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC138932.5-201ENST00000617759 563 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 MIR6500-201ENST00000622700 86 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC095031.1-201ENST00000623685 672 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC048347.1-201ENST00000624621 427 ntBASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC6A13Q9NSD5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 DEFB108F-201ENST00000344638 222 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 MIR423-201ENST00000362201 94 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 RNY4P16-201ENST00000364768 94 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 SNORA23-201ENST00000365128 182 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 Y_RNA.559-201ENST00000384686 107 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 DEFB108C-201ENST00000400154 252 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 RNA5SP129-201ENST00000410276 118 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 RNU2-8P-201ENST00000410727 190 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AL663109.1-201ENST00000411498 844 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 ELOCP17-201ENST00000414751 326 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 UBE2FP1-201ENST00000416536 447 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AL589872.1-201ENST00000426602 288 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC244505.5-201ENST00000443639 207 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 UBE2CP3-201ENST00000502715 450 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC091435.1-201ENST00000505442 584 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC105914.1-201ENST00000511798 226 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 MTCO2P32-201ENST00000514865 403 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC008011.1-201ENST00000545989 227 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC120057.2-201ENST00000571520 271 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC105224.1-201ENST00000587055 421 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 BDH2P1-201ENST00000602288 736 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC015871.2-201ENST00000603605 948 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC090578.1-201ENST00000604955 591 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC103710.1-201ENST00000610003 901 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 PISRT1-201ENST00000626175 531 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 FARSBP1-201ENST00000435808 1778 ntBASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC6A13Q9NSD5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
SLC6A13Q9NSD5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 AC138915.3-201ENST00000562908 1389 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 MIR372-201ENST00000362225 67 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 U8.3-201ENST00000363321 132 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 RNU4-1-201ENST00000363925 141 ntBASIC3.52□□□□□ -1.85
SLC6A13Q9NSD5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms