Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBP3Q9NS15 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBP3Q9NS15 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.11□□□□□ -1.59
LTBP3Q9NS15 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LTBP3Q9NS15 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC125336.1-201ENST00000508893 2827 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC019155.1-201ENST00000382242 574 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 MIR34B-201ENST00000385076 84 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AL136372.1-201ENST00000403060 228 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 RNU4-26P-201ENST00000410270 107 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 SNORA57.3-201ENST00000411095 141 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 ARL5AP1-201ENST00000418991 388 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AL691449.1-201ENST00000426570 421 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 PPIAP3-201ENST00000450588 505 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 HMGN2P26-201ENST00000463169 339 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 RN7SKP219-201ENST00000516825 296 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 RNU6-1314P-201ENST00000517139 104 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 BTF3P12-201ENST00000519620 469 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 FAM60DP-201ENST00000524174 632 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 PSMA2P1-201ENST00000526365 646 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC006064.5-201ENST00000541782 248 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 MIR4775-201ENST00000581168 75 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC010928.3-201ENST00000587712 541 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 LLPHP1-201ENST00000603571 367 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC010201.1-201ENST00000605051 540 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC015967.1-201ENST00000619893 476 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 RMST_7.1-201ENST00000621935 268 ntBASIC5.1□□□□□ -1.59
LTBP3Q9NS15 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.1□□□□□ -1.59
LTBP3Q9NS15 AC092376.2-201ENST00000622621 4116 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AC073346.2-201ENST00000624724 2058 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 RNU6-637P-201ENST00000384050 107 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 OR6C66P-201ENST00000414917 930 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 CYCSP43-201ENST00000438233 310 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 MRPL50P4-201ENST00000446432 475 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 PTMAP3-201ENST00000447474 330 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 MRPS17P3-201ENST00000465453 385 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AF213884.1-201ENST00000488102 463 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AC026427.2-201ENST00000506228 536 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 RN7SKP256-201ENST00000517201 314 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AC107953.1-201ENST00000522216 297 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 CR383656.7-201ENST00000548164 174 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AC067852.4-201ENST00000590314 478 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 RNU6-89P-201ENST00000606519 100 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AL050343.2-201ENST00000607338 280 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 AL160413.1-201ENST00000622780 310 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 U6.114-201ENST00000636407 96 ntBASIC5.09□□□□□ -1.59
LTBP3Q9NS15 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LTBP3Q9NS15 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
LTBP3Q9NS15 AC000374.1-201ENST00000434698 1745 ntBASIC5.09□□□□□ -1.6
LTBP3Q9NS15 AC116667.1-201ENST00000604855 2072 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.08□□□□□ -1.6
LTBP3Q9NS15 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.08□□□□□ -1.6
LTBP3Q9NS15 AL139276.1-201ENST00000311910 1001 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LTBP3Q9NS15 AC067945.1-201ENST00000342609 618 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 SNORA62.1-201ENST00000364287 154 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 Y_RNA.326-201ENST00000365176 113 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 RNU6-1227P-201ENST00000383981 107 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.08□□□□□ -1.6
LTBP3Q9NS15 AL109755.1-201ENST00000401791 649 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 AL359643.1-201ENST00000404109 423 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 HSPE1P12-201ENST00000412576 301 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.08□□□□□ -1.6
LTBP3Q9NS15 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.08□□□□□ -1.6
LTBP3Q9NS15 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.08□□□□□ -1.6
LTBP3Q9NS15 AL353678.1-201ENST00000422735 741 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms