Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC025033.1-201ENST00000463883 194 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 RN7SL354P-201ENST00000469282 294 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL121769.1-201ENST00000469473 401 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 RN7SL303P-201ENST00000469773 251 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 RN7SL717P-201ENST00000478343 297 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC006445.1-201ENST00000491925 405 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AK3P4-201ENST00000504283 583 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 ATG10-208ENST00000513634 618 ntTSL 2 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC022447.1-201ENST00000515358 464 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC027309.2-201ENST00000520566 192 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC010186.2-204ENST00000537668 439 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 ZNF971P-201ENST00000562068 1249 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 MIR4635-201ENST00000583759 79 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 ZNF92P2-201ENST00000600543 1059 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AP001429.1-201ENST00000602568 530 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC024220.1-201ENST00000603675 484 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC010591.1-201ENST00000603941 649 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL355297.2-201ENST00000604792 129 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC025588.2-201ENST00000604851 466 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 MTND4LP5-201ENST00000605152 292 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC007349.4-201ENST00000608114 532 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 FTX_3.1-201ENST00000610451 147 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC008498.1-201ENST00000613012 531 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC005296.1-201ENST00000616145 209 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AC012442.3-202ENST00000636742 206 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 AL161912.2-201ENST00000565707 3007 ntBASIC1.24□□□□□ -2.21
CDC42SE1Q9NRR8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 U8.4-201ENST00000363626 134 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 RNA5SP125-201ENST00000364843 120 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6-234P-201ENST00000365229 104 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6-549P-201ENST00000384433 107 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 RNU1-148P-201ENST00000384472 162 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 SUMO2P12-201ENST00000405924 140 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 TAF13P2-201ENST00000416876 286 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 CYCSP48-201ENST00000417124 323 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AL445685.2-201ENST00000422551 342 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 Z80107.1-201ENST00000436830 412 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 ELOCP3-201ENST00000439303 348 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 GXYLT1P1-201ENST00000446657 490 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC016696.1-201ENST00000446949 318 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 RPL23AP41-201ENST00000484754 458 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC109486.1-201ENST00000486833 374 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC026801.1-201ENST00000497178 464 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC020699.1-201ENST00000505161 445 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 BOLA3P3-201ENST00000505182 232 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC096571.1-202ENST00000506634 735 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 HMGN1P11-201ENST00000508668 303 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 LTV1P1-201ENST00000510683 1237 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 RNA5SP362-201ENST00000516048 118 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6-751P-201ENST00000516382 101 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 RNU6-528P-201ENST00000516926 100 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 HMGB1P1-201ENST00000522557 636 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 HSPA8P13-201ENST00000523715 472 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AL359212.1-201ENST00000556608 614 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 CYCSP39-201ENST00000565821 309 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC078899.2-201ENST00000595282 212 ntBASIC1.23□□□□□ -2.21
CDC42SE1Q9NRR8 AC136601.2-201ENST00000604356 474 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms