Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AP002453.2-201ENST00000533503 320 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 MIR3158-1-201ENST00000583596 81 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AL353997.4-201ENST00000586196 166 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 BBIP1P1-201ENST00000602999 279 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AC112191.3-201ENST00000604371 277 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AL390208.1-201ENST00000605885 644 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AC006133.1-201ENST00000617106 264 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AC004009.2-201ENST00000623016 728 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AC110801.1-201ENST00000623590 212 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AC095031.1-201ENST00000623685 672 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AL365440.1-201ENST00000436135 2167 ntBASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC52A3Q9NQ40 AC244517.1-201ENST00000606030 2086 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 MFSD8-233ENST00000641482 4860 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AP001350.1-201ENST00000601906 1524 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 RNU6-744P-201ENST00000365557 107 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 RNU6-533P-201ENST00000384144 107 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 RNU6-1316P-201ENST00000384242 108 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 SNORA40.3-201ENST00000390964 122 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 Y_RNA.598-201ENST00000410480 95 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 MTCO3P12-201ENST00000416718 547 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 GLRXP1-201ENST00000423261 334 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 PGBD4P3-201ENST00000440731 581 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 KLF3P2-201ENST00000465138 268 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 RN7SL542P-201ENST00000467147 294 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AC068305.1-201ENST00000497406 726 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 SNORA67.7-201ENST00000516664 135 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AP003392.2-201ENST00000527269 208 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AC022878.1-201ENST00000530684 149 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 HSPE1P5-201ENST00000561489 272 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 MIR4429-201ENST00000580105 73 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AC008739.3-201ENST00000603262 127 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AC098614.4-201ENST00000607601 462 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC52A3Q9NQ40 CCT4P2-201ENST00000233836 1548 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 EXOC5P1-201ENST00000510543 1969 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 AC097714.1-201ENST00000511272 1647 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 AC004925.1-201ENST00000624256 2706 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 RNU6-1249P-201ENST00000363237 111 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 Y_RNA.608-201ENST00000410647 95 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 RPS7P15-201ENST00000415804 584 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 MTCO2P5-201ENST00000422621 426 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 AC007742.1-201ENST00000425789 329 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 BX890604.2-201ENST00000427883 474 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 ELOCP26-201ENST00000436067 329 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 HSPE1P28-201ENST00000443139 211 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 AC244505.5-201ENST00000443639 207 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 RPL7P36-201ENST00000444633 681 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 PDSS1P2-201ENST00000449397 678 ntBASIC3.34□□□□□ -1.87
SLC52A3Q9NQ40 AL590365.1-201ENST00000450788 243 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms