Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SNORA67-201ENST00000384423 137 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 SNORD96B-201ENST00000386148 79 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 MIR548I3-201ENST00000408378 149 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 MIR548I1-201ENST00000408810 149 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 RN7SKP114-201ENST00000410327 279 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC009237.10-201ENST00000414112 510 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC108075.1-201ENST00000424692 529 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC004938.1-201ENST00000438468 308 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 SUMO1P3-201ENST00000439961 304 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 KNOP1P3-201ENST00000446933 426 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC026801.1-201ENST00000497178 464 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC092436.3-201ENST00000511788 257 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 Y_RNA.689-201ENST00000516589 107 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 CYCSP27-201ENST00000527643 293 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC091516.1-201ENST00000549191 703 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC026371.1-201ENST00000551867 419 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC007619.2-201ENST00000605743 379 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 AC005086.4-201ENST00000623065 213 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSU72Q9NP77 BTBD10P1-201ENST00000549824 1352 ntBASIC4.91□□□□□ -1.62
SSU72Q9NP77 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
SSU72Q9NP77 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSU72Q9NP77 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSU72Q9NP77 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
SSU72Q9NP77 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSU72Q9NP77 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSU72Q9NP77 MAPK10-286ENST00000641208 8747 ntBASIC4.9□□□□□ -1.62
SSU72Q9NP77 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SSU72Q9NP77 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSU72Q9NP77 Y_RNA.106-201ENST00000363189 100 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 Y_RNA.126-201ENST00000363382 111 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 SNORA70.10-201ENST00000384515 134 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 MIR195-201ENST00000385194 87 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 RNA5SP372-201ENST00000390836 115 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 MIR921-201ENST00000401133 56 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 RPS4XP7-201ENST00000406274 780 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 RNU2-23P-201ENST00000410545 195 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 RNU6-55P-201ENST00000411092 107 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSU72Q9NP77 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 RPL21P2-201ENST00000440049 481 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC064862.4-201ENST00000442180 334 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AL359672.1-201ENST00000442302 409 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC112492.4-201ENST00000456549 352 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 HMGB3P30-201ENST00000457863 606 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC096745.1-201ENST00000509945 370 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC104136.1-201ENST00000512969 394 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 HIGD1AP3-201ENST00000515857 278 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 RNU6-408P-201ENST00000515910 100 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 RNU6-475P-201ENST00000516073 104 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 HMGN1P28-201ENST00000521340 364 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC022882.1-201ENST00000532142 501 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC024940.3-201ENST00000538551 316 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 HMGB3P26-201ENST00000560051 582 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 ATP5J2P6-201ENST00000565203 266 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC100812.1-201ENST00000607622 580 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AL365434.2-201ENST00000607979 234 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AL359547.2-201ENST00000615810 418 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC078938.1-201ENST00000620993 318 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC032011.1-201ENST00000611703 1549 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 EIF2AP4-201ENST00000424793 1781 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 SCN1A-220ENST00000641603 12506 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 AC093775.1-201ENST00000624154 1868 ntBASIC4.9□□□□□ -1.63
SSU72Q9NP77 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSU72Q9NP77 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSU72Q9NP77 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.89□□□□□ -1.63
SSU72Q9NP77 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SSU72Q9NP77 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSU72Q9NP77 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSU72Q9NP77 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSU72Q9NP77 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms