Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AL445665.1-202ENST00000452436 324 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC009963.2-201ENST00000453431 138 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 RN7SL188P-201ENST00000469842 285 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC009120.1-201ENST00000493458 473 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 RPS27AP13-201ENST00000498403 237 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC114781.3-201ENST00000512083 142 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 RNU4-60P-201ENST00000517239 135 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC021678.3-201ENST00000517893 476 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC122688.1-201ENST00000541494 223 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 MIR4311-201ENST00000580794 100 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC068790.4-201ENST00000602474 263 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC005344.1-201ENST00000613391 459 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC004792.1-201ENST00000614523 137 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 RNA5SP439-201ENST00000617595 124 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC091903.1-201ENST00000624322 454 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 DDX18P3-201ENST00000404856 2007 ntBASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NEUROD4Q9HD90 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC140134.1-201ENST00000511830 3544 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 ZNF285B-201ENST00000561698 1767 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AL159987.1-201ENST00000347911 293 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 Y_RNA.274-201ENST00000364714 101 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 RNU6-611P-201ENST00000384276 104 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 Y_RNA.471-201ENST00000384312 102 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 Y_RNA.533-201ENST00000384596 114 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 MIR215-201ENST00000384858 110 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 RNA5SP36-201ENST00000410197 133 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 RNU4-78P-201ENST00000410940 126 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC016712.1-201ENST00000431088 378 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AL132765.1-201ENST00000434165 553 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 REG1CP-206ENST00000447469 496 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AP006222.1-205ENST00000450734 457 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC092647.2-201ENST00000452998 253 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AL139109.1-201ENST00000455491 297 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 RPL37P6-201ENST00000460682 294 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 HMGN2P13-201ENST00000476476 274 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 RPL32P33-201ENST00000487023 394 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 NDUFB4P9-201ENST00000511646 388 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 SNORA70.11-201ENST00000515987 138 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 SNORA70.13-201ENST00000516116 138 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 RN7SKP258-201ENST00000517151 304 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC069113.1-201ENST00000517763 267 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 OR4H12P-201ENST00000556269 907 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 OR1M4P-201ENST00000589199 287 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AL139124.1-201ENST00000609123 421 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 SDR42E1P1-201ENST00000611327 477 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 SNORD39.4-201ENST00000620099 78 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 AC007938.2-201ENST00000604666 2634 ntBASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NEUROD4Q9HD90 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms