Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 Z80107.1-201ENST00000436830 412 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 USP9YP22-201ENST00000438971 294 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC092393.1-201ENST00000439625 742 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 GAPDHP27-201ENST00000447427 1020 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 NDUFA5P7-201ENST00000452914 242 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC092155.2-201ENST00000454675 477 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 PNPLA4P1-201ENST00000458328 305 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 HMGB1P25-201ENST00000468402 607 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 RPS23P3-201ENST00000470993 430 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC084024.2-201ENST00000503480 791 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC096725.1-201ENST00000514266 313 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AL133271.1-201ENST00000538229 291 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 MIR4635-201ENST00000583759 79 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC015688.2-201ENST00000584523 262 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 RPL23AP92-201ENST00000603609 255 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC021749.1-201ENST00000604322 607 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC026790.2-201ENST00000606282 430 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC009974.1-201ENST00000608881 455 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC023158.2-201ENST00000614876 543 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 MIR6817-201ENST00000615588 66 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC231759.1-201ENST00000616455 597 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC018755.4-201ENST00000619715 454 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC068787.1-201ENST00000623908 691 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC243829.7-201ENST00000633081 225 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 IGHVIII-44-202ENST00000636235 289 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 AC109315.1-201ENST00000584143 1347 ntBASIC2.88□□□□□ -1.95
NXF3Q9H4D5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NXF3Q9H4D5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC099786.3-201ENST00000565735 1410 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AP002907.1-201ENST00000606361 1430 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 RNU6-1249P-201ENST00000363237 111 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 RNU4-68P-201ENST00000364314 141 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 RNU6-906P-201ENST00000384700 70 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC005345.1-201ENST00000431868 217 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 SEPT7P5-201ENST00000434048 306 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC093155.1-201ENST00000440164 826 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 EEF1A1P39-201ENST00000440791 250 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC114322.1-201ENST00000506771 926 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC105914.1-201ENST00000511798 226 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 MTCYBP27-201ENST00000555160 670 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 MAGOH2P-202ENST00000584384 429 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC008962.1-201ENST00000605729 304 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AL360181.4-201ENST00000621752 134 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 AC090617.7-201ENST00000623952 126 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 Z99496.1-201ENST00000469424 1477 ntBASIC2.87□□□□□ -1.95
NXF3Q9H4D5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NXF3Q9H4D5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 RNU6-989P-201ENST00000362756 107 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 RNU4-92P-201ENST00000363783 136 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 RNA5SP68-201ENST00000363885 119 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 RNU6-413P-201ENST00000384115 107 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 ANAPC10P1-201ENST00000395991 556 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AL512633.1-201ENST00000399931 655 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 ERHP2-201ENST00000402323 299 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AL024474.1-201ENST00000404655 591 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AL136133.1-201ENST00000413694 376 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 LUZP4P1-201ENST00000415420 344 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms