Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 API5P2-201ENST00000397055 1498 ntBASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCSER1Q9C0I3 AC008568.2-201ENST00000623862 2313 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 MIR181A2-201ENST00000384863 110 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 HMGB1P17-201ENST00000403495 628 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AL450338.1-201ENST00000407987 512 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 RNA5SP38-201ENST00000410750 119 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 BMS1P22-201ENST00000414726 313 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC004854.1-201ENST00000440356 349 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AL592447.1-201ENST00000447592 540 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 NIPA2P5-201ENST00000452282 464 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC023424.2-201ENST00000493479 777 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 UBE2V1P12-201ENST00000503954 474 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC022483.1-201ENST00000514020 567 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC011260.1-201ENST00000578420 472 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 MIR4509-3-201ENST00000578671 94 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 MIR4509-2-201ENST00000583920 94 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC069304.2-201ENST00000605154 435 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 MIR4509-1-201ENST00000618224 94 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AL596245.1-201ENST00000618994 362 ntBASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CCSER1Q9C0I3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 RPL9P7-201ENST00000330965 580 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 SNORA14A-201ENST00000364773 135 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 MIR23A-201ENST00000385245 73 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AL590004.2-201ENST00000404787 371 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AL513043.1-201ENST00000439124 535 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 SDCBPP1-201ENST00000440192 890 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AC005297.2-201ENST00000450430 606 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 HMGB1P28-201ENST00000507778 552 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 SNORA70.16-201ENST00000516390 95 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 HPRT1P3-201ENST00000539521 576 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AC034268.2-201ENST00000571784 482 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AC006504.3-201ENST00000586818 523 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AC024153.1-201ENST00000603103 365 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AL627309.6-201ENST00000606857 840 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AC091046.2-201ENST00000620775 665 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 AC106754.1-201ENST00000562632 1513 ntBASIC3.18□□□□□ -1.9
CCSER1Q9C0I3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AC009812.4-201ENST00000569134 1805 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 SNORA72.3-201ENST00000365074 132 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 RNU6-584P-201ENST00000410350 95 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 MTCO2P8-201ENST00000412213 658 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AL161449.1-201ENST00000414531 1199 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AL449283.1-202ENST00000418249 604 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AC007742.1-201ENST00000425789 329 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AC022018.1-201ENST00000430685 241 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AC024082.2-201ENST00000434771 238 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 ELOCP26-201ENST00000436067 329 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 MTCO2P25-201ENST00000447065 681 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AL031313.1-201ENST00000448435 256 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 EXOSC3P1-201ENST00000448649 500 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 ARPC3P5-201ENST00000448802 534 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AC003982.1-202ENST00000469928 248 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms