Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AC083843.2-201ENST00000568248 6253 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.187-201ENST00000363918 113 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 SNORA73.2-201ENST00000364946 201 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 RNU6-213P-201ENST00000384051 104 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 RNU6-196P-201ENST00000384315 107 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 MIR1911-201ENST00000410783 80 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AL358176.2-201ENST00000425769 204 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AL691449.1-201ENST00000426570 421 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 RPS29P19-201ENST00000479709 171 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AC012181.1-201ENST00000479895 423 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 RPL21P99-201ENST00000480369 423 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AC110792.1-201ENST00000491826 472 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AC005912.1-201ENST00000495392 255 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 DNAJC8P1-201ENST00000554535 372 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AC090615.1-201ENST00000577519 154 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AL022099.1-201ENST00000604551 712 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 HSPE1P14-201ENST00000605812 302 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AC011460.1-201ENST00000636268 1834 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 AP004289.2-201ENST00000444413 1457 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 Z82217.1-201ENST00000625157 8149 ntBASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP4Q9C0A0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 RNA5SP119-201ENST00000362715 117 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 U3.12-201ENST00000364498 214 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.333-201ENST00000365274 102 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 RNU6-1105P-201ENST00000384774 107 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 U3.20-201ENST00000390909 217 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 RNY4P36-201ENST00000391116 96 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AL592114.1-201ENST00000403842 483 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 RNU2-29P-201ENST00000410423 189 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 RAB9AP3-201ENST00000412737 573 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC093578.1-201ENST00000415219 368 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC245054.2-201ENST00000415639 319 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 YME1L1P1-201ENST00000429435 297 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 RPL23AP83-201ENST00000434984 473 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 SUMO1P3-201ENST00000439961 304 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 RAB9AP1-201ENST00000449393 573 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 SUMO1P2-201ENST00000452524 304 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 snoU13.8-201ENST00000458890 104 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC126389.1-201ENST00000477436 290 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 SNRPGP18-201ENST00000553000 214 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AL163153.1-201ENST00000554223 283 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC004817.2-201ENST00000561794 651 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 GLUD1P4-201ENST00000590914 418 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC138965.3-201ENST00000623875 498 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AL022322.2-201ENST00000624072 20397 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC009902.3-201ENST00000606235 2172 ntBASIC5.3□□□□□ -1.56
CNTNAP4Q9C0A0 AC005005.4-201ENST00000623789 16698 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 AL139276.1-201ENST00000311910 1001 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 HSPE1P11-201ENST00000339579 310 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 RNU6-38P-201ENST00000384085 107 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 SNORD116-29-201ENST00000384516 83 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms