Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AL356019.2-201ENST00000556738 3829 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC034105.2-201ENST00000561866 238 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC093249.5-201ENST00000568120 430 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 SIRPB1-213ENST00000568365 1701 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CYCSP40-201ENST00000575927 294 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR4262-201ENST00000578394 54 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR3064-201ENST00000581130 66 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 snoZ6.4-201ENST00000581669 55 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC011471.1-201ENST00000585766 187 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC078899.2-201ENST00000595282 212 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CYCSP1-201ENST00000604815 315 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 OR1X1P-201ENST00000606159 931 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CR769775.3-201ENST00000610388 219 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR6751-201ENST00000610479 63 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AL121809.2-201ENST00000613169 341 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AP005019.3-201ENST00000620418 560 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC100757.2-201ENST00000622316 280 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AL118508.2-201ENST00000622708 673 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AL353898.2-201ENST00000623000 255 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC090643.1-201ENST00000623600 3100 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AL356289.3-201ENST00000640049 2669 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC010300.1-201ENST00000600671 5134 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 TRAPPC8-211ENST00000582539 4391 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 AP003175.1-201ENST00000641383 6658 ntBASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 AP005060.1-201ENST00000623868 3174 ntBASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 AC123769.2-201ENST00000624332 5984 ntBASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 AC096644.4-201ENST00000563417 2912 ntBASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 OR13C1P-202ENST00000641378 2919 ntBASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 APP-209ENST00000440126 2846 ntTSL 2 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
KRTAP4-4Q9BYR3 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 AC018992.1-201ENST00000523778 2149 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 SALL4P7-201ENST00000555779 3120 ntBASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC1.52□□□□□ -2.17
KRTAP4-4Q9BYR3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms