Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.52□□□□□ -2.01
SCAPERQ9BY12 RPS6P14-201ENST00000425165 719 ntBASIC2.52□□□□□ -2.01
SCAPERQ9BY12 HMGB1P12-201ENST00000438594 598 ntBASIC2.52□□□□□ -2.01
SCAPERQ9BY12 AC080013.2-201ENST00000460866 323 ntBASIC2.52□□□□□ -2.01
SCAPERQ9BY12 AC010683.1-201ENST00000473673 378 ntBASIC2.52□□□□□ -2.01
SCAPERQ9BY12 RNU6-943P-201ENST00000516960 98 ntBASIC2.52□□□□□ -2.01
SCAPERQ9BY12 AC125611.2-201ENST00000551907 647 ntBASIC2.52□□□□□ -2.01
SCAPERQ9BY12 AC121761.2-201ENST00000617300 689 ntBASIC2.52□□□□□ -2.01
SCAPERQ9BY12 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCAPERQ9BY12 RNU6-60P-201ENST00000364792 103 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 RPL17P12-201ENST00000413391 526 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 PSMA2P3-201ENST00000429685 675 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.51□□□□□ -2.01
SCAPERQ9BY12 ARPC3P1-201ENST00000437218 533 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.51□□□□□ -2.01
SCAPERQ9BY12 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.51□□□□□ -2.01
SCAPERQ9BY12 HMGB1P47-201ENST00000511281 589 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 AC006329.2-201ENST00000611491 394 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCAPERQ9BY12 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SCAPERQ9BY12 UBE2L2-201ENST00000254302 429 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 RNU1-42P-201ENST00000364033 160 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 AC109780.2-201ENST00000413467 845 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 RNU6-1218P-201ENST00000458990 108 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 AC069528.1-202ENST00000482888 637 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.51□□□□□ -2.01
SCAPERQ9BY12 RPPH1-2P-201ENST00000516688 293 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 SUB1P1-201ENST00000524415 382 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 MTND2P17-201ENST00000550281 688 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 AP001180.3-201ENST00000582221 145 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SCAPERQ9BY12 AC112503.2-201ENST00000609005 552 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 MIR6840-201ENST00000611937 71 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 AL590099.1-201ENST00000615276 138 ntBASIC2.51□□□□□ -2.01
SCAPERQ9BY12 AL136164.4-201ENST00000625013 2135 ntBASIC2.5□□□□□ -2.01
SCAPERQ9BY12 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCAPERQ9BY12 SNORA31-201ENST00000362607 130 ntBASIC2.5□□□□□ -2.01
SCAPERQ9BY12 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.5□□□□□ -2.01
SCAPERQ9BY12 AC009474.2-201ENST00000451383 136 ntBASIC2.5□□□□□ -2.01
SCAPERQ9BY12 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.5□□□□□ -2.01
SCAPERQ9BY12 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.5□□□□□ -2.01
SCAPERQ9BY12 AC021146.7-201ENST00000509604 775 ntBASIC2.5□□□□□ -2.01
SCAPERQ9BY12 AC022790.1-201ENST00000522872 204 ntBASIC2.5□□□□□ -2.01
SCAPERQ9BY12 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.5□□□□□ -2.01
SCAPERQ9BY12 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.5□□□□□ -2.01
SCAPERQ9BY12 MIR4419B-201ENST00000577260 68 ntBASIC2.5□□□□□ -2.01
SCAPERQ9BY12 AC006249.1-201ENST00000621223 471 ntBASIC2.5□□□□□ -2.01
SCAPERQ9BY12 MTND5P35-201ENST00000557537 1720 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 AC090740.1-201ENST00000623193 2262 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 PABPC1P7-201ENST00000413177 1513 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 MTND4P34-201ENST00000572715 1371 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 AL136520.1-201ENST00000600311 1322 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 RNU6-356P-201ENST00000384140 107 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 AL589994.1-201ENST00000404962 340 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 RPL30P3-201ENST00000424262 333 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.49□□□□□ -2.01
SCAPERQ9BY12 LSM1P1-201ENST00000438629 273 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 BNIP3P2-201ENST00000441221 577 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 RPL5P13-201ENST00000462840 709 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 AC090515.1-201ENST00000465295 476 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 HAUS1P1-201ENST00000505275 832 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SCAPERQ9BY12 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.49□□□□□ -2.01
SCAPERQ9BY12 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 uc_338.20-201ENST00000621563 178 ntBASIC2.49□□□□□ -2.01
SCAPERQ9BY12 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 MIR7-2-201ENST00000384970 110 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 MCTS2P-201ENST00000394552 546 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 AL121972.1-201ENST00000402023 252 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 AL590084.1-201ENST00000407885 387 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 MIR1323-201ENST00000408090 73 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 RNU2-40P-201ENST00000410833 196 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 AC009237.2-201ENST00000421358 284 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 AC108734.3-201ENST00000481241 1165 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 AC104581.2-201ENST00000572227 430 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.48□□□□□ -2.01
SCAPERQ9BY12 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
SCAPERQ9BY12 ZNF876P-202ENST00000398732 1485 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 CUL4AP1-201ENST00000514750 1863 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SCAPERQ9BY12 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SCAPERQ9BY12 RNU4-13P-201ENST00000364019 141 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 RNA5SP189-201ENST00000364920 115 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 TAS2R15P-201ENST00000390674 928 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 RPL31P52-201ENST00000407532 367 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 RNU6-174P-201ENST00000410406 106 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.47□□□□□ -2.01
SCAPERQ9BY12 AC234782.4-201ENST00000417646 1048 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 MORF4L1P7-201ENST00000426038 703 ntBASIC2.47□□□□□ -2.01
SCAPERQ9BY12 AC114973.1-201ENST00000429057 632 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms