Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL25A1Q9BXS0 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AC110597.1-201ENST00000562669 3176 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 RNU6-290P-201ENST00000365212 101 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 MIR105-1-201ENST00000385222 81 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AL139039.1-201ENST00000401900 692 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 RN7SKP151-201ENST00000410230 316 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 RN7SKP202-201ENST00000410439 330 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 RPL36P19-201ENST00000430744 301 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AL591704.1-201ENST00000432574 275 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 KRT8P51-201ENST00000438938 274 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 RN7SL432P-201ENST00000484057 298 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AL162424.1-201ENST00000602325 221 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 U6.92-201ENST00000636464 89 ntBASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
COL25A1Q9BXS0 AC100821.1-201ENST00000523153 2479 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 AL121768.1-201ENST00000613917 2544 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 MAPK10-263ENST00000641052 4307 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 SNORD113-8-201ENST00000363497 74 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 Y_RNA.435-201ENST00000384095 112 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 RNU6-102P-201ENST00000384485 104 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 FABP5P13-201ENST00000452144 328 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 RPS27AP1-201ENST00000475545 471 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 RN7SL244P-201ENST00000493405 297 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 AC093767.1-201ENST00000504523 156 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 CPDP1-201ENST00000579660 283 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 AC115085.1-201ENST00000588924 229 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 AL359881.1-201ENST00000602916 267 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 AL590099.1-201ENST00000615276 138 ntBASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.43□□□□□ -1.54
COL25A1Q9BXS0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 Y_RNA.400-201ENST00000383963 111 ntBASIC5.42□□□□□ -1.54
COL25A1Q9BXS0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms