Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC015813.6-201ENST00000624409 5808 ntBASIC4.17□□□□□ -1.74
SSBP3Q9BWW4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 ZNF734P-201ENST00000419494 1534 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 GABPAP-201ENST00000419271 1356 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 Y_RNA.2-201ENST00000362330 96 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 Y_RNA.210-201ENST00000364161 110 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 SNORA70.10-201ENST00000384515 134 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 PGBD4P6-201ENST00000421501 610 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 HIGD1AP11-201ENST00000438361 280 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC099799.1-201ENST00000439809 192 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 RNU6-1132P-201ENST00000459214 107 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 DYNLL1P5-201ENST00000467158 270 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC006511.1-201ENST00000470614 315 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC103987.1-201ENST00000473394 348 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC068781.1-201ENST00000488231 618 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 RN7SL441P-201ENST00000492388 296 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC021146.3-201ENST00000511911 260 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 RNU6-406P-201ENST00000516470 107 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AP006245.2-201ENST00000522004 300 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 EIF4A2P5-201ENST00000529914 499 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AL133271.1-201ENST00000538229 291 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC023157.2-201ENST00000540596 141 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC233702.9-201ENST00000581528 203 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 MIR5692C1-201ENST00000585309 91 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC137590.2-201ENST00000619709 240 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AC019206.1-201ENST00000621938 425 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 AL606534.2-204ENST00000635008 178 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSBP3Q9BWW4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSBP3Q9BWW4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSBP3Q9BWW4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
SSBP3Q9BWW4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 Y_RNA.485-201ENST00000384395 102 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 MIR1302-6-201ENST00000408466 90 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 RNA5SP107-201ENST00000411358 122 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 Z99755.1-201ENST00000414048 380 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 COX5BP7-201ENST00000414780 274 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 OR2AM1P-201ENST00000422137 422 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 FAR2P4-202ENST00000425399 584 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AP000936.3-201ENST00000438127 255 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 RPS29P9-201ENST00000440360 171 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 HSFY6P-201ENST00000445573 403 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AL591623.2-201ENST00000449978 222 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AC114801.2-201ENST00000503825 781 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 COX7A2P2-201ENST00000505291 250 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 SNORA14.1-201ENST00000516113 141 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 SCARNA16.2-201ENST00000516520 172 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 RNU6-1069P-201ENST00000516612 133 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 RNU6-1332P-201ENST00000516666 104 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AC008033.2-201ENST00000542626 177 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AC090115.3-201ENST00000553218 849 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AC125232.2-201ENST00000592457 143 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AC078899.3-201ENST00000599065 212 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AC006254.3-201ENST00000603353 884 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AL355810.1-201ENST00000614629 552 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 AC093775.1-201ENST00000624154 1868 ntBASIC4.15□□□□□ -1.75
SSBP3Q9BWW4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms