Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRFN3Q9BTN0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 LINC01355-201ENST00000566551 5444 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 RNU6-335P-201ENST00000364563 113 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 UBBP2-201ENST00000376781 231 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 U3.26-201ENST00000391236 204 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 RNA5SP241-201ENST00000391326 114 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AL583835.1-201ENST00000399570 407 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AMD1P2-201ENST00000412936 992 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 SYF2P2-201ENST00000417620 583 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC019097.1-201ENST00000424783 735 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC023598.1-201ENST00000472521 361 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC026801.2-201ENST00000515352 425 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 Y_RNA.693-201ENST00000516641 110 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 RN7SL290P-201ENST00000578661 300 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC012669.1-201ENST00000603209 283 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AL035413.2-201ENST00000604801 525 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 HMGN2P28-201ENST00000606102 262 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AL359757.2-201ENST00000624309 274 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 AC138915.3-201ENST00000562908 1389 ntBASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.37□□□□□ -1.71
LRFN3Q9BTN0 DDX10P1-201ENST00000448545 1933 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 Y_RNA.1-201ENST00000352915 104 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 SNORA63-201ENST00000363450 132 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 Y_RNA.142-201ENST00000363491 102 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 RNU6-1085P-201ENST00000363576 107 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 Y_RNA.162-201ENST00000363683 102 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 RNU6-1103P-201ENST00000384150 107 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 Y_RNA.548-201ENST00000384656 105 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 RNU4-65P-201ENST00000410473 140 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 HMGB3P20-201ENST00000417997 600 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AL513185.2-201ENST00000425543 193 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AL157831.1-201ENST00000426134 473 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC133104.1-201ENST00000429100 218 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 FTH1P1-201ENST00000437933 532 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 MTND4P19-201ENST00000446659 478 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC115115.1-201ENST00000449927 248 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC012671.1-201ENST00000451912 203 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 RAD23BP3-201ENST00000454157 1152 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC022364.2-201ENST00000457963 554 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 S100A11P1-201ENST00000477525 312 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC107934.1-201ENST00000522215 217 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 ARL2BPP2-201ENST00000550907 489 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 OR4T1P-201ENST00000554933 911 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AL845331.3-202ENST00000562856 261 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 MIR4795-201ENST00000584182 89 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC022432.1-201ENST00000595739 310 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AP001429.1-201ENST00000602568 530 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 AC245517.5-201ENST00000611529 162 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 MIR6715A-201ENST00000615929 79 ntBASIC4.36□□□□□ -1.71
LRFN3Q9BTN0 MIR6891-201ENST00000618788 93 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms