Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AL121871.1-201ENST00000443413 436 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 RAC1P7-201ENST00000445367 377 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 Z75741.1-201ENST00000446793 314 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC234775.1-201ENST00000454247 670 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 RPL23AP31-201ENST00000456160 467 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AL139824.2-201ENST00000458731 1095 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 RPL30P9-201ENST00000465586 330 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC004263.1-201ENST00000479327 332 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AP001025.2-201ENST00000490908 477 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC017037.2-201ENST00000513850 890 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 SNORA64.4-201ENST00000516632 81 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC104027.1-201ENST00000521887 300 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 MTCO3P24-201ENST00000572729 782 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 BNIP3P22-201ENST00000593399 556 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AL353778.1-201ENST00000603149 408 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC106791.2-201ENST00000604680 391 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 Z99289.3-201ENST00000605586 594 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC096577.2-201ENST00000611455 153 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 AC095031.1-201ENST00000623685 672 ntBASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCM2Q9BSQ5 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 MTCO1P9-201ENST00000505577 1534 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AL391994.1-201ENST00000254724 282 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 FRG1BP-201ENST00000278882 761 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 RNU6-173P-201ENST00000364215 104 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 DEFB109C-201ENST00000382575 264 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 DEFB109B-201ENST00000382656 264 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 MIR135A2-201ENST00000384854 100 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 OR2B8P-201ENST00000432841 938 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC091862.1-201ENST00000438016 1100 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 ISCA1P2-201ENST00000438679 421 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 MTCYBP3-201ENST00000445588 1137 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 OR6K5P-201ENST00000447050 945 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 MTCO1P27-201ENST00000448269 226 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC115115.1-201ENST00000449927 248 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 OR6C5P-201ENST00000452388 923 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC072039.1-201ENST00000477611 581 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 RN7SKP282-201ENST00000516824 299 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC034268.2-201ENST00000571784 482 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 ISCA1P3-201ENST00000577104 373 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 MIR2682-201ENST00000580305 110 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AL353997.4-201ENST00000586196 166 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC072039.2-201ENST00000608883 439 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AL390240.1-201ENST00000612950 384 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AL355810.1-201ENST00000614629 552 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 MIR7112-201ENST00000616126 65 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AL353748.2-201ENST00000622148 471 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 AC091903.1-201ENST00000624322 454 ntBASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCM2Q9BSQ5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCM2Q9BSQ5 OR1S2-201ENST00000302592 978 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 SNORD56.3-201ENST00000363507 71 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 RPS15AP38-201ENST00000413110 372 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms