Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL161912.3-201ENST00000605404 628 ntBASIC2.26□□□□□ -2.05
ABCA3Q99758 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ABCA3Q99758 AC008568.2-201ENST00000623862 2313 ntBASIC2.26□□□□□ -2.05
ABCA3Q99758 AL359740.1-201ENST00000624340 592 ntBASIC2.26□□□□□ -2.05
ABCA3Q99758 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ABCA3Q99758 MTND5P3-201ENST00000438536 1800 ntBASIC2.26□□□□□ -2.05
ABCA3Q99758 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ABCA3Q99758 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ABCA3Q99758 RNU1-109P-201ENST00000383960 147 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 TAS2R15P-201ENST00000390674 928 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 RNA5SP492-201ENST00000411330 114 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 RPS3AP9-201ENST00000417027 792 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 ARPC3P1-201ENST00000437218 533 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 RNU1-123P-201ENST00000458950 160 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AC011979.1-201ENST00000472300 483 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 RPL21P93-201ENST00000480465 489 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AC233702.1-201ENST00000482905 502 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AC093591.1-201ENST00000491435 481 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 MTCYBP37-201ENST00000510642 1133 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ABCA3Q99758 AC135279.1-201ENST00000543493 504 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.25□□□□□ -2.05
ABCA3Q99758 LLPHP1-201ENST00000603571 367 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AC034236.3-201ENST00000605999 461 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AL512598.1-201ENST00000610158 273 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 FO624990.1-201ENST00000636373 85 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA3Q99758 SSXP4-201ENST00000451349 245 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 OR5H4P-201ENST00000510851 923 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA3Q99758 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA3Q99758 SETP2-201ENST00000553886 926 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AC104581.2-201ENST00000572227 430 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ABCA3Q99758 AL590099.1-201ENST00000615276 138 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 AC005296.1-201ENST00000616145 209 ntBASIC2.25□□□□□ -2.05
ABCA3Q99758 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.24□□□□□ -2.05
ABCA3Q99758 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.24□□□□□ -2.05
ABCA3Q99758 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
ABCA3Q99758 MAPK10-266ENST00000641066 6555 ntBASIC2.24□□□□□ -2.05
ABCA3Q99758 MIRLET7G-201ENST00000362280 84 ntBASIC2.24□□□□□ -2.05
ABCA3Q99758 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ABCA3Q99758 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ABCA3Q99758 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.24□□□□□ -2.05
ABCA3Q99758 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.24□□□□□ -2.05
ABCA3Q99758 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.24□□□□□ -2.05
ABCA3Q99758 RPL21P131-201ENST00000497298 483 ntBASIC2.24□□□□□ -2.05
ABCA3Q99758 AC109464.2-201ENST00000510242 943 ntBASIC2.24□□□□□ -2.05
ABCA3Q99758 AL161670.1-201ENST00000554348 137 ntBASIC2.24□□□□□ -2.05
ABCA3Q99758 PSMA3P-201ENST00000555485 635 ntBASIC2.24□□□□□ -2.05
ABCA3Q99758 AC091057.2-201ENST00000602594 792 ntBASIC2.24□□□□□ -2.05
ABCA3Q99758 AL355816.1-201ENST00000607951 118 ntBASIC2.24□□□□□ -2.05
ABCA3Q99758 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.24□□□□□ -2.05
ABCA3Q99758 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ABCA3Q99758 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ABCA3Q99758 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
ABCA3Q99758 PAICSP7-201ENST00000419829 962 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.23□□□□□ -2.05
ABCA3Q99758 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 HMGB1P47-201ENST00000511281 589 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 RNA5SP220-201ENST00000516298 104 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 RNA5SP102-201ENST00000516865 106 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 SNORD59.2-201ENST00000516873 68 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.23□□□□□ -2.05
ABCA3Q99758 AC087441.2-201ENST00000529141 262 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.23□□□□□ -2.05
ABCA3Q99758 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.23□□□□□ -2.05
ABCA3Q99758 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.23□□□□□ -2.05
ABCA3Q99758 PVT1_3.1-201ENST00000620853 95 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 AC012150.2-201ENST00000621300 544 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
ABCA3Q99758 AC012321.1-201ENST00000561622 1588 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ABCA3Q99758 AL136164.4-201ENST00000625013 2135 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.23□□□□□ -2.05
ABCA3Q99758 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
ABCA3Q99758 AL136520.1-201ENST00000600311 1322 ntBASIC2.23□□□□□ -2.05
ABCA3Q99758 AC017099.1-201ENST00000448261 1028 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 ATP5J2P3-201ENST00000451550 258 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 FABP5P6-201ENST00000510588 409 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 RNU1-61P-201ENST00000516107 151 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 AF279873.1-201ENST00000523393 313 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.22□□□□□ -2.05
ABCA3Q99758 AC007620.3-201ENST00000608131 497 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 AC096586.2-201ENST00000610260 441 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 AP003122.6-201ENST00000623831 495 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.22□□□□□ -2.05
ABCA3Q99758 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ABCA3Q99758 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ABCA3Q99758 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ABCA3Q99758 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ABCA3Q99758 Y_RNA.354-201ENST00000365448 111 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 RNU6-174P-201ENST00000410406 106 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.22□□□□□ -2.05
ABCA3Q99758 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.22□□□□□ -2.05
ABCA3Q99758 SSXP9-201ENST00000417503 292 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.22□□□□□ -2.05
ABCA3Q99758 LSM1P1-201ENST00000438629 273 ntBASIC2.22□□□□□ -2.05
ABCA3Q99758 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms