Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.4□□□□□ -2.18
SPG11Q96JI7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.4□□□□□ -2.18
SPG11Q96JI7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
SPG11Q96JI7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SPG11Q96JI7 RN7SKP200-201ENST00000410564 320 ntBASIC1.4□□□□□ -2.19
SPG11Q96JI7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.4□□□□□ -2.19
SPG11Q96JI7 RPS3AP22-201ENST00000488297 769 ntBASIC1.4□□□□□ -2.19
SPG11Q96JI7 RN7SL274P-201ENST00000492268 272 ntBASIC1.4□□□□□ -2.19
SPG11Q96JI7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SPG11Q96JI7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 HMGB1P47-201ENST00000511281 589 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 TBCAP3-201ENST00000512475 312 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 MTCYBP19-201ENST00000517463 1124 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC124283.4-201ENST00000581815 456 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC138649.5-201ENST00000637456 137 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 RNA5SP127-201ENST00000411051 133 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 POLHP1-201ENST00000411806 470 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 TPT1P14-201ENST00000448018 505 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC005297.2-201ENST00000450430 606 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 AP002345.1-201ENST00000456493 928 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 ATG10-AS1-201ENST00000504846 648 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC015720.1-201ENST00000565251 277 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC068135.2-201ENST00000569293 1028 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC025016.1-201ENST00000616746 682 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 AC008121.3-201ENST00000618726 433 ntBASIC1.39□□□□□ -2.19
SPG11Q96JI7 U3.15-201ENST00000365398 212 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 HMGB3P2-201ENST00000411913 584 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.38□□□□□ -2.19
SPG11Q96JI7 HMGN2P19-201ENST00000425149 265 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.38□□□□□ -2.19
SPG11Q96JI7 CALM1P1-201ENST00000442082 433 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 IFNWP4-201ENST00000453148 294 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 RNU6-717P-201ENST00000459076 104 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 RPL23AP62-201ENST00000463396 453 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 AC107015.1-201ENST00000466902 747 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 COX6CP14-201ENST00000469580 174 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.38□□□□□ -2.19
SPG11Q96JI7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.38□□□□□ -2.19
SPG11Q96JI7 AC087468.1-201ENST00000604365 630 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
SPG11Q96JI7 Y_RNA.167-201ENST00000363735 109 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.38□□□□□ -2.19
SPG11Q96JI7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SPG11Q96JI7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.38□□□□□ -2.19
SPG11Q96JI7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.38□□□□□ -2.19
SPG11Q96JI7 AL445305.1-201ENST00000432577 575 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.38□□□□□ -2.19
SPG11Q96JI7 HMGB3P15-201ENST00000507326 574 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.38□□□□□ -2.19
SPG11Q96JI7 MIR5000-201ENST00000577717 103 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 MIR4723-201ENST00000585070 81 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 MIR6788-201ENST00000618842 66 ntBASIC1.38□□□□□ -2.19
SPG11Q96JI7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SPG11Q96JI7 PAICSP7-201ENST00000419829 962 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.37□□□□□ -2.19
SPG11Q96JI7 RPS15AP36-201ENST00000492022 382 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 FABP5P6-201ENST00000510588 409 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SPG11Q96JI7 AC074140.1-201ENST00000621617 208 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 AC092159.4-201ENST00000624944 550 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 ZNF355P-201ENST00000427301 3216 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 CUL4AP1-201ENST00000514750 1863 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SPG11Q96JI7 ZNF271P-202ENST00000465539 1970 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 RNU1-22P-201ENST00000363334 158 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.37□□□□□ -2.19
SPG11Q96JI7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.37□□□□□ -2.19
SPG11Q96JI7 AC104435.1-201ENST00000483483 166 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 AC021146.7-201ENST00000509604 775 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 RNU1-40P-201ENST00000516816 164 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 RNU1-97P-201ENST00000516872 164 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 AL137072.1-201ENST00000603444 466 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 AC024560.3-201ENST00000608482 349 ntBASIC1.37□□□□□ -2.19
SPG11Q96JI7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
SPG11Q96JI7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.36□□□□□ -2.19
SPG11Q96JI7 Y_RNA.518-201ENST00000384552 113 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 RNU1-139P-201ENST00000391307 165 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 MTCYBP45-201ENST00000435243 565 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 RPL34P26-201ENST00000445636 354 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 AL021397.1-201ENST00000451806 248 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 SUMO2P6-201ENST00000505273 288 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.36□□□□□ -2.19
SPG11Q96JI7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SPG11Q96JI7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.36□□□□□ -2.19
SPG11Q96JI7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SPG11Q96JI7 HMGB1P5-201ENST00000255320 642 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 ARF4P2-201ENST00000430209 526 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms