Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC128687.2-201ENST00000609657 566 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 CR381653.2-201ENST00000624041 768 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 MIR6863-201ENST00000636112 90 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 MIR492-201ENST00000638676 116 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
HPS3Q969F9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.39□□□□□ -1.71
HPS3Q969F9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HPS3Q969F9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.39□□□□□ -1.71
HPS3Q969F9 AC138915.3-201ENST00000562908 1389 ntBASIC4.39□□□□□ -1.71
HPS3Q969F9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HPS3Q969F9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HPS3Q969F9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS3Q969F9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HPS3Q969F9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HPS3Q969F9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HPS3Q969F9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HPS3Q969F9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HPS3Q969F9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HPS3Q969F9 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 RNU1-13P-201ENST00000384499 162 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 MIR23B-201ENST00000384832 97 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 RNU6-882P-201ENST00000391025 103 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 RNU4-55P-201ENST00000410731 137 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS3Q969F9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.38□□□□□ -1.71
HPS3Q969F9 EIF1P1-201ENST00000421436 341 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 TIMM9P3-201ENST00000428659 274 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 AL451074.3-201ENST00000437709 472 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 AC122718.1-201ENST00000439448 744 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 RANP8-201ENST00000444720 713 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS3Q969F9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.38□□□□□ -1.71
HPS3Q969F9 NPM1P49-201ENST00000448027 714 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 FAM133DP-201ENST00000464802 691 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 AC004924.1-201ENST00000480160 781 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS3Q969F9 RPS15AP36-201ENST00000492022 382 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HPS3Q969F9 AC146944.2-203ENST00000502493 354 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HPS3Q969F9 AC139495.1-202ENST00000513164 354 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.38□□□□□ -1.71
HPS3Q969F9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.38□□□□□ -1.71
HPS3Q969F9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS3Q969F9 YPEL5P3-201ENST00000547227 352 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 AL022099.1-201ENST00000604551 712 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 AC007684.1-201ENST00000609671 477 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.38□□□□□ -1.71
HPS3Q969F9 AL450472.3-201ENST00000615578 367 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 AC015967.1-201ENST00000619893 476 ntBASIC4.38□□□□□ -1.71
HPS3Q969F9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.38□□□□□ -1.71
HPS3Q969F9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS3Q969F9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HPS3Q969F9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS3Q969F9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HPS3Q969F9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HPS3Q969F9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HPS3Q969F9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HPS3Q969F9 RNU6-181P-201ENST00000363225 107 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 RNU6-173P-201ENST00000364215 104 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 U3.11-201ENST00000364476 212 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 RNU6-1103P-201ENST00000384150 107 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 MIR23A-201ENST00000385245 73 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 RN7SKP159-201ENST00000410657 292 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.37□□□□□ -1.71
HPS3Q969F9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.37□□□□□ -1.71
HPS3Q969F9 UBE2FP1-201ENST00000416536 447 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 SSXP9-201ENST00000417503 292 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AC007283.2-201ENST00000424739 197 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.37□□□□□ -1.71
HPS3Q969F9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS3Q969F9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.37□□□□□ -1.71
HPS3Q969F9 RPL21P112-201ENST00000434403 463 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AC002486.1-201ENST00000435098 391 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AC132479.1-201ENST00000449160 144 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.37□□□□□ -1.71
HPS3Q969F9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS3Q969F9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS3Q969F9 AC010285.1-201ENST00000470580 392 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AC068305.1-201ENST00000497406 726 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 MLLT10P2-201ENST00000506434 249 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AC026726.1-201ENST00000512859 601 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AC114797.1-201ENST00000514003 728 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 RNU6-445P-201ENST00000516949 107 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 FAM92A1P1-201ENST00000528023 890 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AC125611.2-201ENST00000551907 647 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 CBX3P5-201ENST00000552017 521 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AC124947.2-202ENST00000552735 133 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS3Q969F9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.37□□□□□ -1.71
HPS3Q969F9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS3Q969F9 RNU4-89P-201ENST00000607443 133 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AC126118.1-201ENST00000607744 628 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.37□□□□□ -1.71
HPS3Q969F9 AL591424.2-201ENST00000617023 128 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 AL160394.1-201ENST00000624765 724 ntBASIC4.37□□□□□ -1.71
HPS3Q969F9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms