Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 ZNF863P-201ENST00000426746 417 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 RPL23AP30-201ENST00000432419 501 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 CALM1P1-201ENST00000442082 433 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 CEACAMP10-202ENST00000495431 496 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 SCARNA24.1-201ENST00000516465 137 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 RNU6-798P-201ENST00000516912 103 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC087369.1-201ENST00000520775 996 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AP003730.1-201ENST00000524605 285 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC009643.1-201ENST00000532030 391 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC105224.1-201ENST00000587055 421 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 Z84480.1-201ENST00000605131 311 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AL445567.2-201ENST00000618935 498 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AP003122.6-201ENST00000623831 495 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC009033.1-201ENST00000624279 431 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 MIR3662-201ENST00000637030 95 ntBASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATG4AQ8WYN0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 RNA5SP130-201ENST00000364431 114 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 HMGN2P8-201ENST00000391458 268 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 RNU2-47P-201ENST00000410649 186 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 RAC1P3-201ENST00000416129 580 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 USP12PX-201ENST00000432383 1057 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 SEPT14P3-201ENST00000439401 183 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 RPS15AP9-201ENST00000439856 381 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 RPL23AP33-201ENST00000442301 452 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AL732372.2-207ENST00000445840 183 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC140076.1-201ENST00000449897 361 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 SEPT14P2-201ENST00000453405 183 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 RNU7-59P-201ENST00000459101 61 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 MTCYBP18-201ENST00000501056 747 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 SEPT14P4-201ENST00000513445 186 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC114781.4-201ENST00000513707 639 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 FO082796.1-201ENST00000523795 183 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AP000857.1-201ENST00000532151 543 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 HMGB3P26-201ENST00000560051 582 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC090877.1-201ENST00000561418 344 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC034105.3-201ENST00000565294 442 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 HMGB1P6-201ENST00000569046 646 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC098848.2-201ENST00000588023 330 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC091167.4-201ENST00000605079 184 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 MIR7641-1-201ENST00000627518 61 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 ZNF680P1-201ENST00000436625 1469 ntBASIC4.05□□□□□ -1.76
ATG4AQ8WYN0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AL049555.1-201ENST00000562834 1933 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 Y_RNA.70-201ENST00000362886 110 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 RNU1-18P-201ENST00000363062 164 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 RNY3P3-201ENST00000363816 102 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 Y_RNA.381-201ENST00000365666 102 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 MIR153-1-201ENST00000384914 90 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 RNU4-6P-201ENST00000410804 122 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC108032.1-201ENST00000416706 207 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC012498.1-201ENST00000424037 437 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms