Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.35□□□□□ -1.39
NKX2-3Q8TAU0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 AC114947.2-201ENST00000565748 2125 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 HAUS6P2-201ENST00000433254 2404 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 RN7SKP145-201ENST00000363291 303 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 Y_RNA.568-201ENST00000384742 113 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 MIR192-201ENST00000384915 110 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 Y_RNA.580-201ENST00000391004 95 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 NOP56P2-201ENST00000447491 769 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 RN7SL432P-201ENST00000484057 298 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 MIR4433B-201ENST00000581329 102 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 AC010632.3-201ENST00000611377 369 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 AC244107.2-201ENST00000611773 76 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
NKX2-3Q8TAU0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 RLIMP1-201ENST00000339626 1680 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AC010329.2-201ENST00000595195 2737 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AC130650.2-201ENST00000618736 2403 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AC138393.1-203ENST00000327086 343 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 RNU6-1284P-201ENST00000363701 100 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 Y_RNA.292-201ENST00000364904 97 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 RNU1-43P-201ENST00000365052 165 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 RNU6-946P-201ENST00000383878 107 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AC092423.1-201ENST00000430165 186 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AC007389.2-201ENST00000434630 306 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AC022431.1-201ENST00000450941 438 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 RPS29P33-201ENST00000456717 146 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 TRAPPC2P7-201ENST00000509650 231 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AC074250.1-201ENST00000511117 192 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AC074133.1-201ENST00000515696 183 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 IGHVII-53-1-201ENST00000519538 255 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AMZ2P1-203ENST00000565833 850 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 MIR4675-201ENST00000577898 77 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL670379.6-201ENST00000603753 252 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL670379.1-201ENST00000604752 252 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL670379.5-201ENST00000605253 252 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL670379.8-201ENST00000605353 252 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL670379.7-201ENST00000605823 252 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 CR392039.4-201ENST00000624968 501 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AL606537.1-201ENST00000607258 2011 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 OR9K1P-202ENST00000641111 3217 ntBASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NKX2-3Q8TAU0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 Y_RNA.586-201ENST00000391146 98 ntBASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 RNU6-918P-201ENST00000391219 106 ntBASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 RPS4XP7-201ENST00000406274 780 ntBASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 RNA5SP487-201ENST00000410186 122 ntBASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 RN7SKP17-201ENST00000411242 351 ntBASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 AL030996.1-201ENST00000411430 235 ntBASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 EI24P4-201ENST00000423683 1078 ntBASIC6.32□□□□□ -1.4
NKX2-3Q8TAU0 AC093106.2-201ENST00000428212 385 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms