Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 USP12PX-201ENST00000432383 1057 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 SNRPEP7-201ENST00000438350 220 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 MTND5P14-201ENST00000441481 1267 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 OR6K1P-201ENST00000456766 971 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AC093663.1-201ENST00000497190 394 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AC112204.1-201ENST00000502591 103 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 HMGB1P29-201ENST00000505659 499 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AC018797.3-201ENST00000513388 1241 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 RPS27AP18-201ENST00000515536 459 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 SNORA20.3-201ENST00000516880 132 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 RNU2-46P-201ENST00000517038 113 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 RNU6-1003P-201ENST00000517099 105 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AC104986.1-201ENST00000517978 436 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 OR4R3P-201ENST00000525084 838 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AP001893.2-201ENST00000526949 202 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 DEFB109D-201ENST00000529497 240 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 BNIP3P11-201ENST00000603878 563 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 SNORA51-201ENST00000606420 132 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 uc_338.32-201ENST00000615087 172 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AC068880.5-201ENST00000624331 290 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 Y_RNA.296-201ENST00000364930 108 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 RNU6-444P-201ENST00000383988 108 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 RNU6-809P-201ENST00000384461 107 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 MIR490-201ENST00000384865 128 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 RNU2-41P-201ENST00000410991 178 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC126124.2-201ENST00000413542 321 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 TPMTP2-201ENST00000414372 726 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 BX295541.1-201ENST00000417774 250 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 CYP4F29P-201ENST00000420685 446 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC073464.1-201ENST00000429823 534 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 MTND3P23-201ENST00000431980 347 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 ARPC3P5-201ENST00000448802 534 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC239809.1-201ENST00000450470 217 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 MTCO1P42-201ENST00000457379 726 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 RPL31P50-201ENST00000471002 296 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC087312.1-201ENST00000471411 480 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC010301.1-201ENST00000473936 355 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 RPS3AP14-201ENST00000483907 780 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 RPL7P47-201ENST00000497299 556 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 MTCYBP18-201ENST00000501056 747 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 TMEM251P1-201ENST00000503717 318 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 SNORA67.7-201ENST00000516664 135 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 HSPA8P13-201ENST00000523715 472 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AK6P1-201ENST00000540219 478 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AL391840.1-201ENST00000571144 367 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 MIR3158-1-201ENST00000583596 81 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 DUXAP4-201ENST00000603046 613 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC008945.2-201ENST00000606056 604 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AL355816.1-201ENST00000607951 118 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 PISRT1-201ENST00000626175 531 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.63□□□□□ -1.83
LMO3Q8TAP4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.63□□□□□ -1.83
LMO3Q8TAP4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
LMO3Q8TAP4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
LMO3Q8TAP4 AC017071.1-201ENST00000564407 2204 ntBASIC3.62□□□□□ -1.83
LMO3Q8TAP4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LMO3Q8TAP4 AC008725.1-201ENST00000605123 2263 ntBASIC3.62□□□□□ -1.83
LMO3Q8TAP4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.62□□□□□ -1.83
LMO3Q8TAP4 Y_RNA.402-201ENST00000383972 102 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms