Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 RPL23AP87-202ENST00000573039 466 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 MIR548AC-201ENST00000585049 88 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AL670379.2-201ENST00000604983 252 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AL049539.1-201ENST00000611964 459 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AC034229.2-201ENST00000566945 2508 ntBASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNIP1Q8TAD8 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 Y_RNA.262-201ENST00000364641 102 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RNU6-926P-201ENST00000384075 107 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RNU6-80P-201ENST00000384195 107 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RNU2-22P-201ENST00000411266 212 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 AC116036.1-201ENST00000412199 367 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RPL12P3-201ENST00000440080 396 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RN7SL172P-201ENST00000460535 303 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RPL23AP2-201ENST00000471227 466 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RN7SL583P-201ENST00000475692 287 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RPS4XP22-201ENST00000480755 780 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RN7SL547P-201ENST00000490793 290 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 MIR4433B-201ENST00000581329 102 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 RPL23AP78-201ENST00000599928 470 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 AL034351.1-201ENST00000605288 668 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 AC004852.3-201ENST00000614131 326 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 PWAR1-201ENST00000624188 2414 ntBASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNIP1Q8TAD8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.59□□□□□ -1.52
SNIP1Q8TAD8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.59□□□□□ -1.52
SNIP1Q8TAD8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SNIP1Q8TAD8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SNIP1Q8TAD8 AC007529.1-201ENST00000418574 2178 ntBASIC5.59□□□□□ -1.52
SNIP1Q8TAD8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 RNU1-59P-201ENST00000364829 162 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 RNU6-817P-201ENST00000391083 104 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 HMGA1P8-201ENST00000414130 321 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AC099677.1-201ENST00000420575 175 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AC024067.1-201ENST00000426199 223 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 MTND4LP9-201ENST00000427694 174 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 REG1CP-206ENST00000447469 496 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 UQCRBP2-201ENST00000447827 297 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AC100832.1-201ENST00000471945 383 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AC010683.1-201ENST00000473673 378 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 RPS26P21-201ENST00000475397 348 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AC008953.1-201ENST00000497334 318 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 RNU7-175P-201ENST00000515915 61 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AP002001.1-203ENST00000534002 267 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 CR383656.7-201ENST00000548164 174 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 RPL21P9-201ENST00000556149 474 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 TGIF1P1-201ENST00000558095 802 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 MIR548X2-201ENST00000579776 100 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 AC067852.4-201ENST00000590314 478 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 Mico1.1-201ENST00000611698 204 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 U1.25-201ENST00000614085 162 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 MIR8080-201ENST00000622224 89 ntBASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNIP1Q8TAD8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms