Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AL365265.1-201ENST00000621045 234 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AC244100.1-202ENST00000621554 382 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AC130454.1-201ENST00000622948 401 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 AL159972.1-201ENST00000625150 448 ntBASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEDD1Q8NHV4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC008669.1-201ENST00000565823 2178 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 RNU6-1078P-201ENST00000364522 103 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 RNU4-42P-201ENST00000364738 142 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 RNU6-842P-201ENST00000384269 107 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 RNA5SP187-201ENST00000384400 119 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 RNU6-95P-201ENST00000384697 107 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC097374.1-203ENST00000400783 485 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AL583834.1-201ENST00000406943 343 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AL603910.2-201ENST00000407268 136 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 RNU6-1203P-201ENST00000410703 110 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 BX510359.2-201ENST00000417920 305 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AL158071.1-201ENST00000430315 461 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC005154.2-201ENST00000438110 379 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC114495.1-201ENST00000441274 436 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 NOTCH2P1-201ENST00000443481 624 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 RPL23AP43-201ENST00000446445 471 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 MTCO3P8-201ENST00000453691 755 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC098869.1-201ENST00000481627 292 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 SNORA40.15-201ENST00000516884 107 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC025884.1-201ENST00000556034 378 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 RN7SL802P-201ENST00000577858 299 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC024619.4-201ENST00000580924 316 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AC011477.5-201ENST00000586571 259 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 FAM27B-201ENST00000610601 213 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 AL161616.1-201ENST00000611867 286 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 MIR7703-201ENST00000620784 77 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 ADAM5-202ENST00000399789 1942 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 MFSD8-216ENST00000641147 4009 ntBASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEDD1Q8NHV4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 RNU5A-8P-201ENST00000364102 114 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 U3.11-201ENST00000364476 212 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 RNU4-7P-201ENST00000364758 141 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AL359643.1-201ENST00000404109 423 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 RNU2-25P-201ENST00000411041 191 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AL035551.1-201ENST00000446931 348 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 RPS15AP27-201ENST00000449183 343 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AL356981.1-201ENST00000454879 684 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AC245028.2-201ENST00000458673 253 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AC116533.1-201ENST00000459748 321 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AC079804.1-201ENST00000461922 436 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 RN7SL558P-201ENST00000497468 299 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 BNIP3P1-201ENST00000547295 580 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 MIR5699-201ENST00000578903 90 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 SNORA74C-1-201ENST00000580726 201 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 MIR6820-201ENST00000611508 62 ntBASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
NEDD1Q8NHV4 AC005183.1-201ENST00000603687 1979 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 AL391684.1-202ENST00000641293 1636 ntBASIC5.67□□□□□ -1.5
NEDD1Q8NHV4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms