Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 DDX10P1-201ENST00000448545 1933 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 GABPAP-201ENST00000419271 1356 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 MTND4P14-201ENST00000435799 1354 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RNU6-1249P-201ENST00000363237 111 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 Y_RNA.301-201ENST00000364990 103 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RNA5SP151-201ENST00000365632 117 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 SMIM11P1-201ENST00000369586 178 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 Y_RNA.431-201ENST00000384086 102 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RNU1-82P-201ENST00000390851 165 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AL590762.2-201ENST00000395798 571 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RNU4-34P-201ENST00000410431 124 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RNU6-712P-201ENST00000410558 100 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 ARL5AP1-201ENST00000418991 388 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AL137014.1-201ENST00000420490 1226 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RPL7P46-201ENST00000425129 740 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC016712.1-201ENST00000431088 378 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 HMGB3P11-201ENST00000440127 604 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC020550.1-201ENST00000447385 163 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 MTND4P17-201ENST00000470444 350 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC010631.1-201ENST00000474150 156 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RN7SL432P-201ENST00000484057 298 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC108078.2-201ENST00000510750 236 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC026801.2-201ENST00000515352 425 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RNA5SP497-201ENST00000516081 97 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 RNU1-6P-201ENST00000516290 144 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 MTND4P7-201ENST00000523876 130 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AL137161.1-201ENST00000532231 390 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 MIR5699-201ENST00000578903 90 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC020910.3-201ENST00000603701 874 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AL512624.1-201ENST00000613638 469 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 EIF3FP1-201ENST00000613970 806 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AL138721.1-201ENST00000616756 179 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC243312.2-201ENST00000623340 601 ntBASIC4.42□□□□□ -1.7
HIPK4Q8NE63 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HIPK4Q8NE63 AC026951.1-201ENST00000559530 2459 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 LARP1BP1-201ENST00000506036 1359 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 PNPT1P2-201ENST00000456768 2050 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 Y_RNA.138-201ENST00000363462 102 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 Y_RNA.326-201ENST00000365176 113 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 Y_RNA.530-201ENST00000384587 101 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 SSXP9-201ENST00000417503 292 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC004552.1-201ENST00000419089 348 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AL645608.4-201ENST00000423619 154 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 RAC1P6-201ENST00000423911 575 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 MTCO2P12-201ENST00000427426 682 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AL360081.1-201ENST00000428299 555 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 RPS26P3-201ENST00000470205 348 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 BX284632.1-201ENST00000478218 541 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC090543.2-201ENST00000483963 348 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC004057.1-201ENST00000485827 348 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC083904.1-201ENST00000487828 231 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC025164.1-201ENST00000496249 478 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC104806.1-201ENST00000508720 308 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AP005597.4-201ENST00000526762 229 ntBASIC4.41□□□□□ -1.7
HIPK4Q8NE63 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms