Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL049781.1-201ENST00000623195 3585 ntBASIC4.84□□□□□ -1.63
SMC1BQ8NDV3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.84□□□□□ -1.63
SMC1BQ8NDV3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.84□□□□□ -1.64
SMC1BQ8NDV3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SMC1BQ8NDV3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SMC1BQ8NDV3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.84□□□□□ -1.64
SMC1BQ8NDV3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 RNU5A-8P-201ENST00000364102 114 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 Y_RNA.481-201ENST00000384373 102 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 MIR195-201ENST00000385194 87 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AL139247.1-201ENST00000422768 325 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC093156.1-201ENST00000440382 670 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC006011.1-201ENST00000442758 349 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 RAC1P7-201ENST00000445367 377 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC010469.1-201ENST00000463864 576 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 RPL5P30-201ENST00000465511 891 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC012158.1-204ENST00000483430 465 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 ARL4AP2-201ENST00000507378 601 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 OR4R3P-201ENST00000525084 838 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 OR5B10P-201ENST00000532869 642 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AL512360.1-201ENST00000555346 234 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 MIR3167-201ENST00000579623 85 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC068790.5-201ENST00000602741 355 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 LLPHP1-201ENST00000603571 367 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC008966.2-201ENST00000606157 453 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC004908.2-201ENST00000609090 574 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AL031666.3-201ENST00000609320 1006 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC006338.1-201ENST00000618453 749 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC139792.3-201ENST00000623525 224 ntBASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.83□□□□□ -1.64
SMC1BQ8NDV3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 RNA5SP307-201ENST00000362863 116 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 RNU6-1078P-201ENST00000364522 103 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 RNU6-282P-201ENST00000365357 103 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 RNU2-62P-201ENST00000410868 191 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 MTCO2P19-201ENST00000427513 598 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC097713.2-201ENST00000430199 356 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 TIMM9P1-201ENST00000436122 256 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 RPL7P23-201ENST00000493874 747 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 FAM92A1P2-202ENST00000504766 877 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC109635.3-201ENST00000529536 185 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AL031176.1-201ENST00000604554 466 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AL160290.3-201ENST00000604869 165 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AP001596.2-201ENST00000608410 312 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC017083.3-201ENST00000609955 700 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC135507.2-201ENST00000612443 309 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 uc_338.12-201ENST00000616344 181 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC007546.2-201ENST00000623996 360 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AC068254.2-201ENST00000623938 3577 ntBASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SMC1BQ8NDV3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SMC1BQ8NDV3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SMC1BQ8NDV3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SMC1BQ8NDV3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms