Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
CCDC89Q8N998 MTND1P37-201ENST00000636562 264 ntBASIC3.59□□□□□ -1.83
CCDC89Q8N998 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC89Q8N998 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.59□□□□□ -1.84
CCDC89Q8N998 MTND5P33-201ENST00000571250 1450 ntBASIC3.59□□□□□ -1.84
CCDC89Q8N998 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.59□□□□□ -1.84
CCDC89Q8N998 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC89Q8N998 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC89Q8N998 RNU6-217P-201ENST00000384164 104 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC89Q8N998 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 AL365496.1-201ENST00000426885 215 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 USP12PX-201ENST00000432383 1057 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 DDX3P2-201ENST00000446138 111 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 KC877373.1-201ENST00000479066 408 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC89Q8N998 AC020699.1-201ENST00000505161 445 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 MIR2276-201ENST00000516886 89 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC89Q8N998 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 AC006557.5-201ENST00000603126 811 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 AL031281.1-201ENST00000604049 488 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 AC027449.1-201ENST00000608890 407 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 BX323046.1-201ENST00000610145 535 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 AC019176.2-201ENST00000611579 315 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CCDC89Q8N998 AC017071.1-201ENST00000564407 2204 ntBASIC3.58□□□□□ -1.84
CCDC89Q8N998 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC89Q8N998 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 RN7SKP227-201ENST00000364445 330 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 SNORA72.3-201ENST00000365074 132 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC89Q8N998 U8.11-201ENST00000384699 133 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 U8.12-201ENST00000384701 133 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 RNA5SP107-201ENST00000411358 122 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AL008987.1-201ENST00000415528 237 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AL035423.1-201ENST00000420331 213 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 BX890604.2-201ENST00000427883 474 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 U8.18-201ENST00000459285 133 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC008481.1-201ENST00000463278 396 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC233702.1-201ENST00000482905 502 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 RNU6-390P-201ENST00000516259 103 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 SNORA70.18-201ENST00000516696 98 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC090888.1-201ENST00000561335 1141 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC020895.1-201ENST00000595362 272 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC008739.2-201ENST00000597006 317 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 BNIP3P23-201ENST00000599655 511 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AL606834.2-201ENST00000602954 668 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC010591.1-201ENST00000603941 649 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC067959.1-201ENST00000604334 379 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC032011.1-201ENST00000611703 1549 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AL139418.1-201ENST00000613613 177 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC004696.1-201ENST00000614345 607 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC89Q8N998 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 AC090617.7-201ENST00000623952 126 ntBASIC3.57□□□□□ -1.84
CCDC89Q8N998 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC89Q8N998 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC89Q8N998 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC89Q8N998 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC89Q8N998 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC89Q8N998 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC89Q8N998 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC89Q8N998 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CCDC89Q8N998 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC89Q8N998 SNORD21-201ENST00000383953 95 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 RPS7P13-201ENST00000413955 498 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 DBIP2-201ENST00000419076 262 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 AL353678.1-201ENST00000422735 741 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 ZNF863P-201ENST00000426746 417 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 SAR1AP4-201ENST00000429225 591 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC89Q8N998 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC89Q8N998 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC89Q8N998 GAPDHP27-201ENST00000447427 1020 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 AC008264.1-201ENST00000447612 367 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 AC097262.1-201ENST00000452559 548 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 NUTF2P7-201ENST00000453086 375 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 HMGN1P18-201ENST00000457642 277 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 SNORD105B-201ENST00000458770 79 ntBASIC3.56□□□□□ -1.84
CCDC89Q8N998 RN7SL442P-201ENST00000473804 320 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms