Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 U3.39-201ENST00000408569 239 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 VPS26BP1-201ENST00000417155 755 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 USP9YP13-201ENST00000417797 480 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 ZNF90P2-204ENST00000419323 1075 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC009480.2-201ENST00000422916 432 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC010099.3-201ENST00000423896 409 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AL158071.1-201ENST00000430315 461 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 MTCYBP39-201ENST00000437562 491 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 RPL23AP58-201ENST00000440453 469 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AL591719.1-201ENST00000444669 744 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC010631.1-201ENST00000474150 156 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC093663.1-201ENST00000497190 394 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 OR2A20P-203ENST00000498397 1268 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC021146.5-201ENST00000503544 545 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 RNU6-390P-201ENST00000516259 103 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC009094.1-201ENST00000564443 426 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 MIR3138-201ENST00000585238 82 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC020895.1-201ENST00000595362 272 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AP000403.1-201ENST00000603349 851 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 PRELID3BP8-201ENST00000604148 295 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC034229.4-201ENST00000607861 441 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 OR10AB1P-201ENST00000609613 938 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AL355472.4-201ENST00000610233 626 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC019176.2-201ENST00000611579 315 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC090970.3-201ENST00000612566 866 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AL445567.2-201ENST00000618935 498 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 MIR492-201ENST00000638676 116 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AC006927.3-201ENST00000638789 384 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 AP000553.6-201ENST00000641242 118 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 API5P2-201ENST00000397055 1498 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 MTND5P29-201ENST00000458676 1807 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 MTND4P16-201ENST00000466108 1367 ntBASIC2.49□□□□□ -2.01
LINC01561Q8N1V8 ZNF833P-201ENST00000424938 1494 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RNU6-500P-201ENST00000362349 107 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RNA5SP42-201ENST00000364278 115 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 U8.14-201ENST00000390843 143 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RNA5SP354-201ENST00000391247 136 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 ATP5F1P3-201ENST00000397213 657 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AL136116.1-201ENST00000403591 381 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RNU6-55P-201ENST00000411092 107 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RNU6-954P-201ENST00000411355 107 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RNA5SP107-201ENST00000411358 122 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RPL37P21-201ENST00000435890 276 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 TPT1P12-201ENST00000448968 492 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 OR6C5P-201ENST00000452388 923 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RPS27P29-201ENST00000463110 252 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AC026801.1-201ENST00000497178 464 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AC020893.1-201ENST00000502452 580 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AC114786.4-201ENST00000508771 728 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 MTND1P22-201ENST00000510572 951 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AC114797.1-201ENST00000514003 728 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RNA5SP208-201ENST00000516156 78 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 RNU6-64P-201ENST00000517119 105 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 NDUFB9P3-201ENST00000521269 501 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AC009643.1-201ENST00000532030 391 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 TRAV37-201ENST00000553906 342 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AC007954.1-201ENST00000554198 494 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 AL391261.3-201ENST00000557194 520 ntBASIC2.48□□□□□ -2.01
LINC01561Q8N1V8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms