Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 GTF2IP3-201ENST00000433887 494 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 OR4G11P-201ENST00000492842 939 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC097462.2-201ENST00000504623 481 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC010625.1-201ENST00000511296 403 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC087808.1-201ENST00000520501 361 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 OR5AK1P-201ENST00000524837 922 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AP001189.2-201ENST00000527320 189 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 SNRPGP16-201ENST00000533275 226 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC010738.1-201ENST00000604970 987 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 RNU6-1192P-201ENST00000612197 107 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC140725.3-201ENST00000616193 880 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 RNU6-489P-201ENST00000618289 107 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC123767.1-202ENST00000620407 817 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC010297.1-201ENST00000623948 149 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AC010872.1-201ENST00000624225 675 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 Z99496.1-201ENST00000469424 1477 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 RNA5SP393-201ENST00000363423 117 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 SNORD21-201ENST00000383953 95 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 SNORA40.2-201ENST00000390847 128 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AL360182.1-201ENST00000397433 468 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 RNU2-15P-201ENST00000410692 191 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 OR4K6P-201ENST00000416478 897 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AL513477.1-202ENST00000417061 214 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 RPL23AP74-201ENST00000437246 471 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AC009961.3-201ENST00000449832 765 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 TRGVB-201ENST00000453257 471 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 RPL9P33-201ENST00000484311 566 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 COX6CP8-201ENST00000522620 226 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AC004486.1-201ENST00000546846 233 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AC010620.2-201ENST00000600135 313 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 RPL23AP92-201ENST00000603609 255 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AP001330.4-201ENST00000604350 154 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 AC112220.2-201ENST00000605513 533 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 MIR6076-201ENST00000617521 113 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 SGO1P2-201ENST00000429458 1589 ntBASIC2.94□□□□□ -1.94
CCDC65Q8IXS2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 OR5J1P-201ENST00000313544 939 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 Y_RNA.25-201ENST00000362528 102 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 RNU6-1155P-201ENST00000363554 107 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 RNU6-7-201ENST00000364784 107 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 RNU6-8-201ENST00000365467 107 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 RNU6-224P-201ENST00000384055 107 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 MIR592-201ENST00000384959 97 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 Y_RNA.578-201ENST00000390903 88 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 RNU2-42P-201ENST00000410697 113 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AL513175.2-201ENST00000422071 443 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 COTL1P1-201ENST00000422309 375 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 MTCYBP11-201ENST00000447254 1109 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 RPL39P6-201ENST00000448289 150 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 Z82190.1-201ENST00000454534 490 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 PNPLA4P1-201ENST00000458328 305 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AP000852.1-201ENST00000472460 573 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC006390.1-201ENST00000508068 283 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 RN7SKP40-201ENST00000517211 242 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC025881.1-201ENST00000518851 512 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AC100870.1-201ENST00000522035 505 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 ELOCP31-201ENST00000540463 467 ntBASIC2.93□□□□□ -1.94
CCDC65Q8IXS2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms