Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 COX7A2P2-201ENST00000505291 250 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 VWA8P1-201ENST00000510889 176 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC139495.1-202ENST00000513164 354 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC114781.4-201ENST00000513707 639 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 RNU6-507P-201ENST00000516045 100 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 Y_RNA.702-201ENST00000516843 96 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 RNA5SP337-201ENST00000517007 109 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 MYL12AP1-201ENST00000518490 515 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 MIR5685-201ENST00000579080 79 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC090616.5-202ENST00000582111 297 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 MIR3158-1-201ENST00000583596 81 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC005255.1-201ENST00000593748 216 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AL049634.3-201ENST00000604968 457 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC093788.1-201ENST00000609356 927 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AL359314.1-201ENST00000616913 261 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AC112204.3-201ENST00000623822 332 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 AL159972.1-201ENST00000625150 448 ntBASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
C9orf139Q6ZV77 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC116096.1-201ENST00000566804 2314 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RNA5SP167-201ENST00000365461 116 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AL359837.1-201ENST00000381357 287 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RNU6-213P-201ENST00000384051 104 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RNU6-339P-201ENST00000384310 107 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RNU6-456P-201ENST00000384493 107 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RNU6-876P-201ENST00000391295 104 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RPL7P60-201ENST00000397636 735 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RPS4XP8-201ENST00000402039 771 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RNU4-6P-201ENST00000410804 122 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 MTATP6P18-201ENST00000417994 673 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RPS15AP12-201ENST00000419498 388 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 CKS1BP5-201ENST00000434172 273 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC119618.1-201ENST00000434191 222 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 HLA-N-201ENST00000437516 135 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 FTH1P1-201ENST00000437933 532 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RPS29P7-201ENST00000439662 171 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RPS15AP9-201ENST00000439856 381 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 FDX1P2-201ENST00000450769 375 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 SNRPGP5-201ENST00000456003 220 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RPS20P24-201ENST00000457473 361 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 SNORD121B-201ENST00000458838 81 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC079382.1-201ENST00000493346 557 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC025445.1-201ENST00000502728 300 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC021146.1-201ENST00000511202 716 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RNA5SP154-201ENST00000516193 111 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 RNU6-1281P-201ENST00000516223 105 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC090572.1-201ENST00000519251 160 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AP001646.1-201ENST00000527936 915 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC104383.1-201ENST00000530297 370 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC091516.1-201ENST00000549191 703 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 SETP2-201ENST00000553886 926 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 HSPE1P5-201ENST00000561489 272 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC005730.3-201ENST00000583067 366 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC068790.3-201ENST00000602988 553 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC025449.1-201ENST00000603896 529 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AL592436.1-201ENST00000605135 558 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AL590099.1-201ENST00000615276 138 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC006133.1-201ENST00000617106 264 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 AC104985.2-201ENST00000620598 500 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 MAPK10-373ENST00000641983 6772 ntBASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf139Q6ZV77 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms