Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDC42BPAQ5VT25 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDC42BPAQ5VT25 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDC42BPAQ5VT25 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDC42BPAQ5VT25 SNORD56.5-201ENST00000364281 72 ntBASIC2.18□□□□□ -2.06
CDC42BPAQ5VT25 AL513185.2-201ENST00000425543 193 ntBASIC2.18□□□□□ -2.06
CDC42BPAQ5VT25 DNAJC19P4-201ENST00000440115 345 ntBASIC2.18□□□□□ -2.06
CDC42BPAQ5VT25 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.18□□□□□ -2.06
CDC42BPAQ5VT25 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.18□□□□□ -2.06
CDC42BPAQ5VT25 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CDC42BPAQ5VT25 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 AL365400.1-201ENST00000431854 640 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 HMGB1P45-201ENST00000435986 653 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 AC068781.1-201ENST00000488231 618 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 MTCYBP18-201ENST00000501056 747 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 AC018754.1-201ENST00000607486 925 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 AC007620.3-201ENST00000608131 497 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 AC090774.1-201ENST00000435925 246 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 RPL23AP41-201ENST00000484754 458 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 AC025755.1-201ENST00000521306 278 ntBASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.17□□□□□ -2.06
CDC42BPAQ5VT25 AC093536.2-201ENST00000565257 1406 ntBASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 MAPK10-266ENST00000641066 6555 ntBASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 RNU1-101P-201ENST00000391171 127 ntBASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 RPL7P31-201ENST00000450192 724 ntBASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 SEM1P1-201ENST00000506694 209 ntBASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.16□□□□□ -2.06
CDC42BPAQ5VT25 AC245100.2-201ENST00000454544 1679 ntBASIC2.15□□□□□ -2.06
CDC42BPAQ5VT25 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 Y_RNA.224-201ENST00000364308 111 ntBASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 RNU6-1027P-201ENST00000383998 107 ntBASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 RNY1P14-201ENST00000384426 108 ntBASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 MIR7-2-201ENST00000384970 110 ntBASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 MIR1304-201ENST00000408243 91 ntBASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 HMGN2P20-201ENST00000437531 273 ntBASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 AC008427.1-201ENST00000503102 655 ntBASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 RMST_2.1-201ENST00000617263 136 ntBASIC2.15□□□□□ -2.07
CDC42BPAQ5VT25 AL136133.1-201ENST00000413694 376 ntBASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 HMGB3P30-201ENST00000457863 606 ntBASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 AC006270.2-201ENST00000578523 652 ntBASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 HSPE1P14-201ENST00000605812 302 ntBASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 RNU6-356P-201ENST00000384140 107 ntBASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 RPL23AP16-201ENST00000441715 421 ntBASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 AC093281.2-201ENST00000510153 597 ntBASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 AC080078.3-201ENST00000605407 463 ntBASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.14□□□□□ -2.07
CDC42BPAQ5VT25 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 U3.15-201ENST00000365398 212 ntBASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 MIR320A-201ENST00000385302 82 ntBASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 AL451074.3-201ENST00000437709 472 ntBASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 AC112503.2-201ENST00000609005 552 ntBASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 AL592494.3-201ENST00000609485 464 ntBASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDC42BPAQ5VT25 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 OR10R1P-201ENST00000441524 1141 ntBASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 AC244505.5-201ENST00000443639 207 ntBASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 AC096571.1-202ENST00000506634 735 ntBASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 MIR5194-201ENST00000582634 120 ntBASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 MIR6840-201ENST00000611937 71 ntBASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.12□□□□□ -2.07
CDC42BPAQ5VT25 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDC42BPAQ5VT25 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDC42BPAQ5VT25 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.11□□□□□ -2.07
CDC42BPAQ5VT25 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.11□□□□□ -2.07
CDC42BPAQ5VT25 AC004223.1-201ENST00000479840 271 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms