Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 MIR335-201ENST00000362173 94 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 RNA5SP223-201ENST00000365174 120 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 RNU6-1027P-201ENST00000383998 107 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 SNORA48.4-201ENST00000391089 134 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AL138885.1-201ENST00000405921 675 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 RPL21P109-201ENST00000422213 475 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC234779.1-201ENST00000425910 285 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 COX6CP13-201ENST00000428703 226 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 RPL21P112-201ENST00000434403 463 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC087884.1-201ENST00000469738 328 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC108078.2-201ENST00000510750 236 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 RN7SKP21-201ENST00000516503 220 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC115085.1-201ENST00000588924 229 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC012443.1-201ENST00000605605 231 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AC023813.4-201ENST00000607580 580 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 AL136313.1-201ENST00000624804 202 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 BCORP1-203ENST00000513194 5093 ntBASIC6.29□□□□□ -1.4
RC3H1Q5TC82 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RC3H1Q5TC82 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 RBPJP2-201ENST00000618187 1444 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 AL590240.1-201ENST00000334118 313 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 Y_RNA.122-201ENST00000363331 96 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 RNU6-960P-201ENST00000364056 120 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 SNORA23-201ENST00000365128 182 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 MIR613-201ENST00000385248 95 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 RNU6-493P-201ENST00000391321 108 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 RNU6-1203P-201ENST00000410703 110 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 RPL21P38-201ENST00000418090 167 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 AL732292.1-201ENST00000426692 226 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 OR2AQ1P-201ENST00000451972 200 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 RPS29P26-201ENST00000477483 171 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 AC093853.1-201ENST00000515689 483 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 SNORA25.14-201ENST00000516481 132 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 RNU6-685P-201ENST00000517088 95 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 AC109329.1-201ENST00000518744 317 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 RANP3-201ENST00000530970 276 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 VN1R91P-201ENST00000594377 169 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 MZT1P2-201ENST00000604387 248 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 MIR6830-201ENST00000636015 70 ntBASIC6.28□□□□□ -1.4
RC3H1Q5TC82 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RC3H1Q5TC82 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 AC097461.1-201ENST00000568928 2821 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 RNY3P11-201ENST00000364153 102 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.352-201ENST00000365439 102 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 RNU6-214P-201ENST00000384130 107 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 RNU6-393P-201ENST00000384475 107 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 SNORA70.10-201ENST00000384515 134 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 U3.30-201ENST00000391308 210 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 AC016831.4-201ENST00000438302 307 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 AL450023.3-201ENST00000440592 271 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 AL031274.1-201ENST00000450334 232 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 RNU7-120P-201ENST00000459334 63 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 RBBP4P6-201ENST00000508098 202 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.683-201ENST00000516508 93 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 AC008521.1-201ENST00000587471 187 ntBASIC6.27□□□□□ -1.41
RC3H1Q5TC82 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms