Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 MTND1P4-201ENST00000435196 415 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 MTND5P14-201ENST00000441481 1267 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AL022238.1-201ENST00000442557 355 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 RPS20P32-201ENST00000456044 356 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 FAM172BP-201ENST00000487497 1089 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 RPL21P13-201ENST00000488305 481 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 MTND2P33-201ENST00000506452 1031 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 FABP5P5-201ENST00000515537 406 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 RN7SKP116-201ENST00000516902 319 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AC107934.2-201ENST00000518653 310 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AP002453.2-201ENST00000533503 320 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 EIF1P4-201ENST00000572664 335 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 MIR4528-201ENST00000577763 90 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 MIR544B-201ENST00000582372 78 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AC005771.1-201ENST00000585581 349 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 NDUFA8P1-201ENST00000605525 367 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AC013476.2-201ENST00000614456 459 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 FAM157B-203ENST00000639350 358 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 RPS4XP5-202ENST00000449995 1334 ntBASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
TTC39AQ5SRH9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
TTC39AQ5SRH9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TTC39AQ5SRH9 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 RNU6-1243P-201ENST00000364028 107 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 RNU6-809P-201ENST00000384461 107 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 RNU6-297P-201ENST00000384636 107 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 HSPE1P26-201ENST00000405341 275 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AL356583.2-201ENST00000426536 280 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC010975.2-201ENST00000427781 588 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 RPL23AP83-201ENST00000434984 473 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 SNRPEP7-201ENST00000438350 220 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 BX322784.1-201ENST00000455793 1077 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 TRBV26-201ENST00000456572 344 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 BX510359.1-201ENST00000456973 237 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC021678.1-201ENST00000505195 936 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 POU5F1P7-201ENST00000508759 541 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 MTCO1P24-201ENST00000515438 1558 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC116096.1-201ENST00000566804 2314 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 MIR5697-201ENST00000578045 78 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AL589743.7-201ENST00000612637 233 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC025588.4-201ENST00000615802 908 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 CRYM-AS1-204ENST00000637983 556 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 TNPO1P3-201ENST00000436471 2662 ntBASIC4.08□□□□□ -1.76
TTC39AQ5SRH9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 MTND5P28-201ENST00000438005 1594 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 HMGN1P14-201ENST00000412459 517 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AMD1P2-201ENST00000412936 992 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 TPMTP2-201ENST00000414372 726 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 RPL21P32-201ENST00000419877 477 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AL513174.1-201ENST00000423182 629 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AL445669.1-201ENST00000426743 755 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 AC104073.1-201ENST00000451988 151 ntBASIC4.07□□□□□ -1.76
TTC39AQ5SRH9 OR6K1P-201ENST00000456766 971 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms