Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 snoU13.28-201ENST00000459235 104 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 OR4G11P-201ENST00000492842 939 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC074029.2-201ENST00000551045 634 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC012254.4-201ENST00000588843 273 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC103710.4-201ENST00000609301 899 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 DDX10P1-201ENST00000448545 1933 ntBASIC1.87□□□□□ -2.11
CCDC58Q4VC31 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC58Q4VC31 CCT4P2-201ENST00000233836 1548 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 SNORA48.2-201ENST00000390926 124 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 SSXP10-201ENST00000402595 565 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AL122016.1-201ENST00000403365 367 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 RPL17P12-201ENST00000413391 526 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 TATDN1P1-201ENST00000414123 891 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 USP12PX-201ENST00000432383 1057 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC107626.1-201ENST00000471084 183 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC006499.2-201ENST00000513470 337 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 SNORA31.23-201ENST00000517219 133 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC090897.2-201ENST00000581715 130 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC007229.1-201ENST00000590455 412 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC005498.1-201ENST00000592125 465 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AL033523.1-201ENST00000605153 153 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 HMGB1P51-201ENST00000605166 638 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC135507.1-201ENST00000607214 561 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 MIR92B-201ENST00000607575 96 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 AC013468.1-201ENST00000608680 598 ntBASIC1.86□□□□□ -2.11
CCDC58Q4VC31 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.86□□□□□ -2.11
CCDC58Q4VC31 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 RPS3AP24-201ENST00000407896 734 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 EIF4EP4-201ENST00000424916 578 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AC234781.2-201ENST00000426370 994 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 RPS3AP12-201ENST00000443616 753 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 MTCYBP3-201ENST00000445588 1137 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AC005002.1-201ENST00000447458 540 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AL136380.1-201ENST00000447970 162 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 SNRPGP18-201ENST00000553000 214 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 MIR4287-201ENST00000579398 78 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AC002487.1-201ENST00000604565 994 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AC120053.1-201ENST00000607706 736 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 AC025034.2-201ENST00000623264 286 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 MTND4P27-201ENST00000450813 1354 ntBASIC1.85□□□□□ -2.11
CCDC58Q4VC31 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC58Q4VC31 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 RN7SKP226-201ENST00000364912 300 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 RNU6-234P-201ENST00000365229 104 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 SNORA36C-201ENST00000384289 132 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC009963.1-201ENST00000417265 157 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 HMGN2P19-201ENST00000425149 265 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 ARL5AP3-201ENST00000439327 386 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC025750.2-201ENST00000442609 450 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC055731.1-201ENST00000474387 401 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 OR52A4P-202ENST00000481634 799 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC107398.1-201ENST00000486904 505 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 OR52A4P-203ENST00000498233 1014 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC58Q4VC31 AC096571.1-202ENST00000506634 735 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 SNORA70.16-201ENST00000516390 95 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 RNA5SP281-201ENST00000516504 135 ntBASIC1.84□□□□□ -2.11
CCDC58Q4VC31 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms