Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AL132765.1-201ENST00000434165 553 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 DDX3P2-201ENST00000446138 111 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 Z99127.3-201ENST00000448158 395 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AC003071.1-201ENST00000451219 789 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AC126389.1-201ENST00000477436 290 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 ARL4AP2-201ENST00000507378 601 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AC117522.1-201ENST00000509821 380 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AC008958.1-201ENST00000511047 682 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 MYL12AP1-201ENST00000518490 515 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 OR5AQ1P-201ENST00000527596 927 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 RPS3AP4-201ENST00000555161 764 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AL355836.1-201ENST00000555951 870 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AP001330.5-201ENST00000607176 411 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AC068944.2-201ENST00000610373 403 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.96□□□□□ -1.61
CCDC144BQ3MJ40 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CCDC144BQ3MJ40 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
CCDC144BQ3MJ40 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 Y_RNA.402-201ENST00000383972 102 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 RNU6-641P-201ENST00000384006 107 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 RNU6-74P-201ENST00000384235 107 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 Y_RNA.573-201ENST00000384763 105 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 RPS4XP8-201ENST00000402039 771 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 PPIAP31-201ENST00000405422 495 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 EIF1P3-201ENST00000423841 334 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 RPL23AP30-201ENST00000432419 501 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 RAD23BP3-201ENST00000454157 1152 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AC027673.1-201ENST00000456245 405 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AC106872.2-201ENST00000494303 480 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 RN7SL691P-201ENST00000494487 301 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 RPL23AP55-201ENST00000498163 452 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AC020593.1-201ENST00000507399 299 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AC105914.1-201ENST00000511798 226 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 Y_RNA.693-201ENST00000516641 110 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AL512360.1-201ENST00000555346 234 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 CYP4A43P-201ENST00000568156 121 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AC008536.2-201ENST00000607284 349 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AL158196.1-201ENST00000616786 434 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AC008785.1-201ENST00000624475 456 ntBASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC144BQ3MJ40 AC006971.1-201ENST00000407916 4486 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 MIR372-201ENST00000362225 67 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 SNORD74.4-201ENST00000364129 80 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL583835.1-201ENST00000399570 407 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC018630.2-202ENST00000422992 927 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL356867.1-201ENST00000429623 299 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 HMGB3P12-201ENST00000438745 556 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL138799.3-201ENST00000438968 350 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC069285.2-201ENST00000440210 275 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL353748.1-201ENST00000440753 474 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 RPS4XP4-201ENST00000443195 763 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 FGF7P6-202ENST00000451282 293 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 SNORA84-201ENST00000459229 133 ntBASIC4.95□□□□□ -1.62
CCDC144BQ3MJ40 RPS20P20-201ENST00000460498 340 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms