Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC010153.1-201ENST00000432862 727 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.72□□□□□ -1.81
USP41Q3LFD5 CYCSP32-201ENST00000440548 321 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC021382.1-201ENST00000483523 359 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC093663.1-201ENST00000497190 394 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC005921.1-201ENST00000510589 286 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.72□□□□□ -1.81
USP41Q3LFD5 RN7SKP83-201ENST00000516512 178 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 IGKV2-26-201ENST00000518305 343 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AP004371.1-201ENST00000525240 214 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC007115.1-201ENST00000546853 234 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AL121603.1-201ENST00000553815 142 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.72□□□□□ -1.81
USP41Q3LFD5 TPMTP1-201ENST00000592307 737 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 SNRPGP15-201ENST00000600149 222 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC119751.7-201ENST00000600494 245 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC068276.1-201ENST00000605793 379 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 RN7SKP299-201ENST00000606679 301 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC064807.4-201ENST00000607201 407 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.72□□□□□ -1.81
USP41Q3LFD5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.72□□□□□ -1.81
USP41Q3LFD5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.72□□□□□ -1.81
USP41Q3LFD5 AL133383.2-201ENST00000622958 2336 ntBASIC3.72□□□□□ -1.81
USP41Q3LFD5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP41Q3LFD5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP41Q3LFD5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP41Q3LFD5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
USP41Q3LFD5 AC092125.1-201ENST00000562568 1995 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 MFSD8-233ENST00000641482 4860 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP41Q3LFD5 RNU6-335P-201ENST00000364563 113 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 RNU5E-5P-201ENST00000365379 116 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 RNU6-629P-201ENST00000384061 103 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 AL359704.1-201ENST00000411586 781 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 AC109583.1-201ENST00000432156 268 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 THAP5P1-201ENST00000439089 262 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 AC112653.1-201ENST00000443851 386 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 RPL9P32-201ENST00000464118 620 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 RN7SL594P-201ENST00000470590 287 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 AC010424.1-201ENST00000506336 297 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 AC017037.2-201ENST00000513850 890 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 RN7SKP60-201ENST00000516985 239 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 AC022146.1-201ENST00000595307 847 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.71□□□□□ -1.82
USP41Q3LFD5 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP41Q3LFD5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP41Q3LFD5 AL645937.1-201ENST00000641739 1652 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.71□□□□□ -1.82
USP41Q3LFD5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP41Q3LFD5 AL390237.1-201ENST00000404226 1415 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP41Q3LFD5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 RNA5SP235-201ENST00000365411 114 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 RNU6-359P-201ENST00000365466 108 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 RNU6-533P-201ENST00000384144 107 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 Z92545.1-201ENST00000411782 234 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 BX323014.1-201ENST00000412876 237 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 AC108734.1-201ENST00000439549 399 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 NPM1P49-201ENST00000448027 714 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 MTND1P29-201ENST00000448112 647 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 AC104308.1-201ENST00000454621 333 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 HMGN2P7-201ENST00000456186 273 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 FCF1P8-201ENST00000510322 597 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 RNU6-1095P-201ENST00000516148 108 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 AP004242.1-201ENST00000533701 349 ntBASIC3.7□□□□□ -1.82
USP41Q3LFD5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.7□□□□□ -1.82
USP41Q3LFD5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms