Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CNTN1Q12860 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CNTN1Q12860 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CNTN1Q12860 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CNTN1Q12860 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CNTN1Q12860 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
CNTN1Q12860 AL161781.1-201ENST00000354277 403 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CNTN1Q12860 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 Y_RNA.548-201ENST00000384656 105 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 HSPE1P26-201ENST00000405341 275 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CNTN1Q12860 AL137014.1-201ENST00000420490 1226 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.19□□□□□ -1.9
CNTN1Q12860 MTND1P20-201ENST00000430341 950 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 MTND5P25-201ENST00000430499 799 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 RPL7P34-201ENST00000433316 712 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.19□□□□□ -1.9
CNTN1Q12860 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.19□□□□□ -1.9
CNTN1Q12860 AC098826.2-201ENST00000452011 651 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 ELOCP23-201ENST00000452014 332 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 OR6C5P-201ENST00000452388 923 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 snoU13.4-201ENST00000458916 104 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 S100A11P2-201ENST00000467589 312 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.19□□□□□ -1.9
CNTN1Q12860 AC004062.1-201ENST00000509926 645 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.19□□□□□ -1.9
CNTN1Q12860 AC017037.2-201ENST00000513850 890 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 RNU6-714P-201ENST00000516963 103 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.19□□□□□ -1.9
CNTN1Q12860 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CNTN1Q12860 AL845331.3-202ENST00000562856 261 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.19□□□□□ -1.9
CNTN1Q12860 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.19□□□□□ -1.9
CNTN1Q12860 uc_338.25-201ENST00000613756 156 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 AL031667.3-201ENST00000620124 655 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.19□□□□□ -1.9
CNTN1Q12860 AC079416.3-201ENST00000624479 549 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 AC007671.2-201ENST00000637344 619 ntBASIC3.19□□□□□ -1.9
CNTN1Q12860 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CNTN1Q12860 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.19□□□□□ -1.9
CNTN1Q12860 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CNTN1Q12860 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CNTN1Q12860 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.18□□□□□ -1.9
CNTN1Q12860 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNTN1Q12860 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNTN1Q12860 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CNTN1Q12860 Y_RNA.18-201ENST00000362461 102 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 Y_RNA.302-201ENST00000364997 102 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 RNU6-744P-201ENST00000365557 107 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 RNU6-1316P-201ENST00000384242 108 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 MIR320C1-201ENST00000408566 88 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AC107081.1-201ENST00000414975 361 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AC245291.1-201ENST00000419501 328 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.18□□□□□ -1.9
CNTN1Q12860 LSM1P1-201ENST00000438629 273 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.18□□□□□ -1.9
CNTN1Q12860 MTCO2P6-201ENST00000463134 685 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 VN1R17P-201ENST00000472048 1090 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AC068587.2-201ENST00000478386 781 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 RPS3AP22-201ENST00000488297 769 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AL024509.2-201ENST00000493462 493 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.18□□□□□ -1.9
CNTN1Q12860 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.18□□□□□ -1.9
CNTN1Q12860 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.18□□□□□ -1.9
CNTN1Q12860 RN7SKP289-201ENST00000517244 295 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.18□□□□□ -1.9
CNTN1Q12860 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.18□□□□□ -1.9
CNTN1Q12860 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.18□□□□□ -1.9
CNTN1Q12860 TRAV37-201ENST00000553906 342 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AC145350.1-201ENST00000567426 208 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.18□□□□□ -1.9
CNTN1Q12860 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
CNTN1Q12860 SNORD84-203ENST00000584275 78 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.18□□□□□ -1.9
CNTN1Q12860 AC018638.7-201ENST00000605836 1114 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AL360219.1-201ENST00000610230 366 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AC135507.2-201ENST00000612443 309 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AL590099.1-201ENST00000615276 138 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AL360181.4-201ENST00000621752 134 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 AP003485.2-201ENST00000623636 610 ntBASIC3.18□□□□□ -1.9
CNTN1Q12860 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.18□□□□□ -1.9
CNTN1Q12860 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CNTN1Q12860 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.18□□□□□ -1.9
CNTN1Q12860 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNTN1Q12860 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CNTN1Q12860 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
CNTN1Q12860 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
CNTN1Q12860 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.17□□□□□ -1.9
CNTN1Q12860 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNTN1Q12860 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNTN1Q12860 OR1S2-201ENST00000302592 978 ntBASIC3.17□□□□□ -1.9
CNTN1Q12860 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CNTN1Q12860 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.17□□□□□ -1.9
CNTN1Q12860 MIR135A2-201ENST00000384854 100 ntBASIC3.17□□□□□ -1.9
CNTN1Q12860 UBA52P6-201ENST00000399822 382 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms