Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.17□□□□□ -1.9
SCN1BQ07699 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
SCN1BQ07699 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SCN1BQ07699 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SCN1BQ07699 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SCN1BQ07699 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SCN1BQ07699 AC007656.2-201ENST00000624902 4547 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC004972.1-201ENST00000623934 2209 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCN1BQ07699 MIR148B-201ENST00000362252 99 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 RNU1-13P-201ENST00000384499 162 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 U8.14-201ENST00000390843 143 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AL513331.1-201ENST00000411908 397 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.16□□□□□ -1.9
SCN1BQ07699 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.16□□□□□ -1.9
SCN1BQ07699 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.16□□□□□ -1.9
SCN1BQ07699 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.16□□□□□ -1.9
SCN1BQ07699 OR4C10P-201ENST00000434991 931 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.16□□□□□ -1.9
SCN1BQ07699 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.16□□□□□ -1.9
SCN1BQ07699 ELOCP30-201ENST00000447108 299 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC093392.2-201ENST00000450682 337 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.16□□□□□ -1.9
SCN1BQ07699 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.16□□□□□ -1.9
SCN1BQ07699 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.16□□□□□ -1.9
SCN1BQ07699 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.16□□□□□ -1.9
SCN1BQ07699 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.16□□□□□ -1.9
SCN1BQ07699 RNU7-59P-201ENST00000459101 61 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC055855.1-201ENST00000489563 579 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.16□□□□□ -1.9
SCN1BQ07699 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.16□□□□□ -1.9
SCN1BQ07699 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.16□□□□□ -1.9
SCN1BQ07699 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.16□□□□□ -1.9
SCN1BQ07699 CDC42P4-201ENST00000510507 563 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.16□□□□□ -1.9
SCN1BQ07699 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SCN1BQ07699 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.16□□□□□ -1.9
SCN1BQ07699 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.16□□□□□ -1.9
SCN1BQ07699 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.16□□□□□ -1.9
SCN1BQ07699 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.16□□□□□ -1.9
SCN1BQ07699 MIR4307-201ENST00000582802 84 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCN1BQ07699 ZYXP1-201ENST00000617638 118 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC079684.1-201ENST00000621405 437 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.16□□□□□ -1.9
SCN1BQ07699 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.16□□□□□ -1.9
SCN1BQ07699 AC097655.1-201ENST00000635075 318 ntBASIC3.16□□□□□ -1.9
SCN1BQ07699 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SCN1BQ07699 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SCN1BQ07699 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.16□□□□□ -1.9
SCN1BQ07699 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCN1BQ07699 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCN1BQ07699 AC091564.4-201ENST00000533934 2194 ntBASIC3.15□□□□□ -1.9
SCN1BQ07699 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.15□□□□□ -1.9
SCN1BQ07699 SNORD56.3-201ENST00000363507 71 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SCN1BQ07699 MIR30B-201ENST00000384850 88 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SCN1BQ07699 AC025750.1-201ENST00000399891 379 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 RNU2-33P-201ENST00000410344 192 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.15□□□□□ -1.91
SCN1BQ07699 AC099548.1-201ENST00000421443 426 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.15□□□□□ -1.91
SCN1BQ07699 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCN1BQ07699 SETD6P1-201ENST00000444575 317 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 AL357552.1-201ENST00000445254 415 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.15□□□□□ -1.91
SCN1BQ07699 RPS20P22-201ENST00000473700 357 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 LINC00888-204ENST00000487386 421 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.15□□□□□ -1.91
SCN1BQ07699 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.15□□□□□ -1.91
SCN1BQ07699 RNA5SP291-201ENST00000517222 105 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.15□□□□□ -1.91
SCN1BQ07699 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.15□□□□□ -1.91
SCN1BQ07699 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.15□□□□□ -1.91
SCN1BQ07699 AC123904.3-201ENST00000547218 814 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.15□□□□□ -1.91
SCN1BQ07699 DUXAP6-201ENST00000553858 601 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.15□□□□□ -1.91
SCN1BQ07699 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.15□□□□□ -1.91
SCN1BQ07699 AL606834.2-201ENST00000602954 668 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 SNORA62.6-201ENST00000606322 83 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 AC034229.4-201ENST00000607861 441 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.15□□□□□ -1.91
SCN1BQ07699 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.15□□□□□ -1.91
SCN1BQ07699 AC083809.1-201ENST00000615051 472 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 AL161629.2-201ENST00000615347 275 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 FP236240.3-201ENST00000623061 327 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.15□□□□□ -1.91
SCN1BQ07699 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.15□□□□□ -1.91
SCN1BQ07699 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
SCN1BQ07699 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.15□□□□□ -1.91
SCN1BQ07699 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SCN1BQ07699 AP004289.2-201ENST00000444413 1457 ntBASIC3.15□□□□□ -1.91
SCN1BQ07699 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms