Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SOX4Q06945 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX4Q06945 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX4Q06945 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX4Q06945 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SOX4Q06945 Y_RNA.396-201ENST00000383949 103 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SOX4Q06945 RNA5SP332-201ENST00000391063 115 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 MIR298-201ENST00000401212 88 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 AL445189.1-201ENST00000405722 338 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 RNU6-516P-201ENST00000411381 104 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX4Q06945 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX4Q06945 RPL7P37-201ENST00000425095 738 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.14□□□□□ -1.59
SOX4Q06945 AC016831.4-201ENST00000438302 307 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 CYCSP24-201ENST00000445119 316 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 RPS17P13-201ENST00000448974 407 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 AC009220.1-201ENST00000451614 275 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 AL354710.1-201ENST00000453641 246 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX4Q06945 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX4Q06945 HMGB3P30-201ENST00000457863 606 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 AC006463.2-201ENST00000473326 348 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 AC135721.1-201ENST00000497954 479 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX4Q06945 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX4Q06945 RNU6-408P-201ENST00000515910 100 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 SNORA14.1-201ENST00000516113 141 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 Y_RNA.719-201ENST00000517156 106 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX4Q06945 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.14□□□□□ -1.59
SOX4Q06945 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SOX4Q06945 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX4Q06945 AC009570.1-201ENST00000609599 745 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.14□□□□□ -1.59
SOX4Q06945 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.14□□□□□ -1.59
SOX4Q06945 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SOX4Q06945 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SOX4Q06945 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SOX4Q06945 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SOX4Q06945 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
SOX4Q06945 AC092376.2-201ENST00000622621 4116 ntBASIC5.14□□□□□ -1.59
SOX4Q06945 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SOX4Q06945 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SOX4Q06945 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 AC032011.1-201ENST00000611703 1549 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 RNU6-874P-201ENST00000362390 105 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 RNU6-266P-201ENST00000364225 107 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 Y_RNA.399-201ENST00000383955 105 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 SNORA70F-201ENST00000384142 135 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 RNU6-432P-201ENST00000384196 109 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 RNA5SP187-201ENST00000384400 119 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 SNORA16.2-201ENST00000390991 127 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 RN7SKP159-201ENST00000410657 292 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 RNU2-64P-201ENST00000411315 191 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 RPLP0P7-201ENST00000416050 667 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 USMG5P1-201ENST00000425964 177 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX4Q06945 RPL23AP69-201ENST00000431134 458 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 RPL35AP21-201ENST00000437667 333 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 Z95327.1-201ENST00000446082 482 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX4Q06945 AC002553.2-201ENST00000453217 340 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.13□□□□□ -1.59
SOX4Q06945 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX4Q06945 SLC25A15P5-201ENST00000508033 253 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX4Q06945 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX4Q06945 RNU6-475P-201ENST00000516073 104 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 SCARNA16.2-201ENST00000516520 172 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX4Q06945 GSTP1P1-201ENST00000548078 319 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX4Q06945 AL355297.3-201ENST00000604082 446 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 AC008162.1-201ENST00000604718 254 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 AL670379.4-201ENST00000605279 254 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 MIR6864-201ENST00000617935 70 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 AC067931.1-201ENST00000624190 671 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 AC073869.10-201ENST00000642016 354 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SOX4Q06945 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX4Q06945 AL122126.1-201ENST00000546905 1318 ntBASIC5.13□□□□□ -1.59
SOX4Q06945 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX4Q06945 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX4Q06945 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SOX4Q06945 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX4Q06945 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX4Q06945 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX4Q06945 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms