Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.3□□□□□ -1.88
GABPAQ06546 AC006499.2-201ENST00000513470 337 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 RNU6-150P-201ENST00000516237 95 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
GABPAQ06546 MTCO2P15-201ENST00000532655 656 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.3□□□□□ -1.88
GABPAQ06546 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.3□□□□□ -1.88
GABPAQ06546 AC011468.4-201ENST00000603942 409 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AC245297.2-201ENST00000610119 565 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AC092106.3-201ENST00000611308 722 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AP002782.1-201ENST00000623107 614 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AC009039.2-201ENST00000624524 529 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.3□□□□□ -1.88
GABPAQ06546 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
GABPAQ06546 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.3□□□□□ -1.88
GABPAQ06546 AC092435.3-201ENST00000565538 3654 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GABPAQ06546 AC092593.1-201ENST00000515413 1815 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GABPAQ06546 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
GABPAQ06546 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GABPAQ06546 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
GABPAQ06546 AC097714.1-201ENST00000511272 1647 ntBASIC3.3□□□□□ -1.88
GABPAQ06546 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.29□□□□□ -1.88
GABPAQ06546 ZNF542P-204ENST00000482727 1305 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 AC093831.2-201ENST00000624393 3427 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GABPAQ06546 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 MIR591-201ENST00000385290 95 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 HMGB1P17-201ENST00000403495 628 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 RNA5SP21-201ENST00000410917 96 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 MTCO2P5-201ENST00000422621 426 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 AC019097.1-201ENST00000424783 735 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 AC079780.1-201ENST00000428259 207 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 RNU7-136P-201ENST00000458819 69 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 SNORD109B-201ENST00000458961 67 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 SNORD109A-201ENST00000459128 67 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GABPAQ06546 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.29□□□□□ -1.88
GABPAQ06546 AC021146.8-201ENST00000507455 733 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 AC093331.1-201ENST00000521474 169 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 DEFB131D-201ENST00000526803 184 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GABPAQ06546 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.29□□□□□ -1.88
GABPAQ06546 MTND1P24-201ENST00000552175 861 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.29□□□□□ -1.88
GABPAQ06546 SNORD84-203ENST00000584275 78 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 AC090115.4-201ENST00000609970 188 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.29□□□□□ -1.88
GABPAQ06546 AC006927.4-201ENST00000639187 543 ntBASIC3.29□□□□□ -1.88
GABPAQ06546 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GABPAQ06546 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GABPAQ06546 AC021755.1-201ENST00000559747 1447 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
GABPAQ06546 AL365361.1-201ENST00000566942 3481 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
GABPAQ06546 RNU6-28P-201ENST00000362378 107 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 RNU6-83P-201ENST00000384568 112 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 MIR512-1-201ENST00000384913 84 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
GABPAQ06546 RNU6-757P-201ENST00000410334 100 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 RNU2-52P-201ENST00000410680 190 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 TPMTP2-201ENST00000414372 726 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 AL008987.1-201ENST00000415528 237 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 HMGB1P49-201ENST00000418882 569 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 FTH1P1-201ENST00000437933 532 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 RPL7P52-201ENST00000449200 742 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.28□□□□□ -1.88
GABPAQ06546 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.28□□□□□ -1.88
GABPAQ06546 AL024509.2-201ENST00000493462 493 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 MLLT10P2-201ENST00000506434 249 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC093281.2-201ENST00000510153 597 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.28□□□□□ -1.88
GABPAQ06546 RNU6-1095P-201ENST00000516148 108 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 CYCSP2-201ENST00000558168 301 ntBASIC3.28□□□□□ -1.88
GABPAQ06546 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.28□□□□□ -1.88
GABPAQ06546 AC007619.2-201ENST00000605743 379 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms