Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.08□□□□□ -2.08
H3F3AP84243 AP006248.3-201ENST00000623580 594 ntBASIC2.08□□□□□ -2.08
H3F3AP84243 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.08□□□□□ -2.08
H3F3AP84243 TPTE2P4-201ENST00000258589 1605 ntBASIC2.08□□□□□ -2.08
H3F3AP84243 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
H3F3AP84243 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
H3F3AP84243 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
H3F3AP84243 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
H3F3AP84243 MIR449A-201ENST00000362113 91 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 RNA5SP289-201ENST00000362332 137 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 Y_RNA.500-201ENST00000384466 111 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 RNA5SP80-201ENST00000410475 111 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.07□□□□□ -2.08
H3F3AP84243 HMGB3P31-201ENST00000413333 595 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.07□□□□□ -2.08
H3F3AP84243 RNU7-26P-201ENST00000458980 63 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 MTND4LP3-201ENST00000468320 276 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 RPL31P60-201ENST00000478450 367 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 FAM172BP-201ENST00000487497 1089 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.07□□□□□ -2.08
H3F3AP84243 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.07□□□□□ -2.08
H3F3AP84243 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.07□□□□□ -2.08
H3F3AP84243 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.07□□□□□ -2.08
H3F3AP84243 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.07□□□□□ -2.08
H3F3AP84243 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.07□□□□□ -2.08
H3F3AP84243 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.07□□□□□ -2.08
H3F3AP84243 OR4R2P-201ENST00000530815 597 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.07□□□□□ -2.08
H3F3AP84243 GLYCAM1-201ENST00000546596 285 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 AC007115.1-201ENST00000546853 234 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.07□□□□□ -2.08
H3F3AP84243 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.07□□□□□ -2.08
H3F3AP84243 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.07□□□□□ -2.08
H3F3AP84243 TRAV28-201ENST00000557548 323 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 AC105137.2-201ENST00000569073 466 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 DNAJC19P3-201ENST00000594491 331 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 AC009318.4-201ENST00000620496 486 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.07□□□□□ -2.08
H3F3AP84243 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
H3F3AP84243 MTCO1P18-201ENST00000455518 1419 ntBASIC2.07□□□□□ -2.08
H3F3AP84243 AC005336.3-201ENST00000623833 2679 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.06□□□□□ -2.08
H3F3AP84243 RNA5SP27-201ENST00000363839 119 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 MORF4L1P6-201ENST00000418771 268 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AL365496.1-201ENST00000426885 215 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.06□□□□□ -2.08
H3F3AP84243 RPS15AP28-201ENST00000435088 386 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.06□□□□□ -2.08
H3F3AP84243 WASF1P1-201ENST00000447560 1131 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 LINC00888-204ENST00000487386 421 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.06□□□□□ -2.08
H3F3AP84243 AC147055.4-201ENST00000504399 745 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 XKRY-201ENST00000510392 1100 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 MRPS36P2-201ENST00000512569 299 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.06□□□□□ -2.08
H3F3AP84243 RNU6-27P-201ENST00000516146 107 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.06□□□□□ -2.08
H3F3AP84243 SUB1P1-201ENST00000524415 382 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AC068339.2-201ENST00000534395 618 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.06□□□□□ -2.08
H3F3AP84243 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.06□□□□□ -2.08
H3F3AP84243 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.06□□□□□ -2.08
H3F3AP84243 AC010738.1-201ENST00000604970 987 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AP000254.1-201ENST00000609934 520 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AC004852.3-201ENST00000614131 326 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.06□□□□□ -2.08
H3F3AP84243 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.06□□□□□ -2.08
H3F3AP84243 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
H3F3AP84243 ZNF663P-202ENST00000641770 1131 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
H3F3AP84243 AC008568.2-201ENST00000623862 2313 ntBASIC2.06□□□□□ -2.08
H3F3AP84243 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.05□□□□□ -2.08
H3F3AP84243 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
H3F3AP84243 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
H3F3AP84243 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
H3F3AP84243 U3.20-201ENST00000390909 217 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 AL513475.1-201ENST00000406602 315 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 AL023807.1-201ENST00000407932 359 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 U3.37-201ENST00000408528 213 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.05□□□□□ -2.08
H3F3AP84243 AC107081.1-201ENST00000414975 361 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.05□□□□□ -2.08
H3F3AP84243 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
H3F3AP84243 AC233981.1-201ENST00000423224 461 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.05□□□□□ -2.08
H3F3AP84243 AC234781.2-201ENST00000426370 994 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 MTATP6P11-201ENST00000428071 670 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.05□□□□□ -2.08
H3F3AP84243 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.05□□□□□ -2.08
H3F3AP84243 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.05□□□□□ -2.08
H3F3AP84243 DPPA3P1-201ENST00000448050 469 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.05□□□□□ -2.08
H3F3AP84243 RPS15AP27-201ENST00000449183 343 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 SNORA59A-201ENST00000459326 152 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 AC114322.1-201ENST00000506771 926 ntBASIC2.05□□□□□ -2.08
H3F3AP84243 AC006390.1-201ENST00000508068 283 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms