Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
SEC61A1P61619 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SEC61A1P61619 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SEC61A1P61619 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.5□□□□□ -1.85
SEC61A1P61619 SPRR2C-201ENST00000290702 219 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 Y_RNA.126-201ENST00000363382 111 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 Y_RNA.159-201ENST00000363674 87 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 RNU4-1-201ENST00000363925 141 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 RNA5SP130-201ENST00000364431 114 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.5□□□□□ -1.85
SEC61A1P61619 RN7SKP263-201ENST00000411194 309 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SEC61A1P61619 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.5□□□□□ -1.85
SEC61A1P61619 AC138393.2-201ENST00000414742 246 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.5□□□□□ -1.85
SEC61A1P61619 RPS15AP12-201ENST00000419498 388 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.5□□□□□ -1.85
SEC61A1P61619 TIMM9P3-201ENST00000428659 274 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 MRPS18BP2-201ENST00000434310 759 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.5□□□□□ -1.85
SEC61A1P61619 AP1S2P1-201ENST00000457344 379 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 snoU13.8-201ENST00000458890 104 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 AC023598.1-201ENST00000472521 361 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 RN7SL271P-201ENST00000487601 295 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 NIPA2P2-201ENST00000496376 1083 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 Y_RNA.693-201ENST00000516641 110 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 RNU4-60P-201ENST00000517239 135 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.5□□□□□ -1.85
SEC61A1P61619 AC109635.3-201ENST00000529536 185 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 AP003385.6-201ENST00000531603 374 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.5□□□□□ -1.85
SEC61A1P61619 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.5□□□□□ -1.85
SEC61A1P61619 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.5□□□□□ -1.85
SEC61A1P61619 AC025678.1-201ENST00000567861 338 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.5□□□□□ -1.85
SEC61A1P61619 AC090615.1-201ENST00000577519 154 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.5□□□□□ -1.85
SEC61A1P61619 AL136363.1-201ENST00000605349 337 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 AC008536.2-201ENST00000607284 349 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 MIR6867-201ENST00000610636 67 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
SEC61A1P61619 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.5□□□□□ -1.85
SEC61A1P61619 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.5□□□□□ -1.85
SEC61A1P61619 AC112204.3-201ENST00000623822 332 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 RNA5SP196-201ENST00000625967 102 ntBASIC3.5□□□□□ -1.85
SEC61A1P61619 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SEC61A1P61619 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.5□□□□□ -1.85
SEC61A1P61619 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SEC61A1P61619 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SEC61A1P61619 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.5□□□□□ -1.85
SEC61A1P61619 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SEC61A1P61619 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A1P61619 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A1P61619 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A1P61619 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A1P61619 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A1P61619 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.49□□□□□ -1.85
SEC61A1P61619 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A1P61619 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A1P61619 FRG1BP-201ENST00000278882 761 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SEC61A1P61619 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SEC61A1P61619 Y_RNA.38-201ENST00000362617 102 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 RNU6-694P-201ENST00000364071 147 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 U3.15-201ENST00000365398 212 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 SNORA20.2-201ENST00000383922 131 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 RNU6-456P-201ENST00000384493 107 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 RNU6-821P-201ENST00000390995 107 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 RNU11-4P-201ENST00000391149 133 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 MIR1250-201ENST00000408098 113 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 RNU2-8P-201ENST00000410727 190 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.49□□□□□ -1.85
SEC61A1P61619 RPL30P2-201ENST00000414021 291 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.49□□□□□ -1.85
SEC61A1P61619 RPS6P12-201ENST00000432491 726 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 AC119618.1-201ENST00000434191 222 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.49□□□□□ -1.85
SEC61A1P61619 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.49□□□□□ -1.85
SEC61A1P61619 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.49□□□□□ -1.85
SEC61A1P61619 RPL23AP46-201ENST00000438548 490 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 AC112653.1-201ENST00000443851 386 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.49□□□□□ -1.85
SEC61A1P61619 MTND5P20-201ENST00000448677 143 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 PPIAP3-201ENST00000450588 505 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.49□□□□□ -1.85
SEC61A1P61619 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.49□□□□□ -1.85
SEC61A1P61619 snoU13.3-201ENST00000459441 104 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SEC61A1P61619 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.49□□□□□ -1.85
SEC61A1P61619 AC023194.1-201ENST00000493084 308 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 AC008628.2-201ENST00000502605 298 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.49□□□□□ -1.85
SEC61A1P61619 AC117522.1-201ENST00000509821 380 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 AC099522.1-202ENST00000514718 367 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 Y_RNA.702-201ENST00000516843 96 ntBASIC3.49□□□□□ -1.85
SEC61A1P61619 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.49□□□□□ -1.85
SEC61A1P61619 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.49□□□□□ -1.85
SEC61A1P61619 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.49□□□□□ -1.85
SEC61A1P61619 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.49□□□□□ -1.85
SEC61A1P61619 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms