Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.59□□□□□ -1.83
RPS3AP61247 MIR3146-201ENST00000580367 79 ntBASIC3.59□□□□□ -1.83
RPS3AP61247 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.59□□□□□ -1.83
RPS3AP61247 AF038458.1-201ENST00000588406 262 ntBASIC3.59□□□□□ -1.83
RPS3AP61247 AC010620.1-201ENST00000601088 1102 ntBASIC3.59□□□□□ -1.83
RPS3AP61247 AL606834.2-201ENST00000602954 668 ntBASIC3.59□□□□□ -1.83
RPS3AP61247 U73023.1-201ENST00000603134 700 ntBASIC3.59□□□□□ -1.83
RPS3AP61247 AP001981.2-201ENST00000603241 418 ntBASIC3.59□□□□□ -1.83
RPS3AP61247 AC245517.5-201ENST00000611529 162 ntBASIC3.59□□□□□ -1.83
RPS3AP61247 AC026422.1-201ENST00000623961 452 ntBASIC3.59□□□□□ -1.83
RPS3AP61247 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.59□□□□□ -1.83
RPS3AP61247 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.59□□□□□ -1.83
RPS3AP61247 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RPS3AP61247 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.59□□□□□ -1.84
RPS3AP61247 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
RPS3AP61247 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RPS3AP61247 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
RPS3AP61247 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RPS3AP61247 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPS3AP61247 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RPS3AP61247 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RPS3AP61247 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPS3AP61247 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RPS3AP61247 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RPS3AP61247 RNA5SP515-201ENST00000364570 118 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 RNY3P10-201ENST00000384764 102 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 AL445189.1-201ENST00000405722 338 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 Y_RNA.598-201ENST00000410480 95 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.58□□□□□ -1.84
RPS3AP61247 NDUFB4P6-201ENST00000436819 366 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 AC005094.1-201ENST00000440420 368 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 SSXP4-201ENST00000451349 245 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 MTND2P24-201ENST00000453434 806 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.58□□□□□ -1.84
RPS3AP61247 SNRPGP9-201ENST00000456025 225 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 CFTRP1-201ENST00000456646 183 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.58□□□□□ -1.84
RPS3AP61247 RNA5SP269-201ENST00000459032 137 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 FTH1P2-201ENST00000466086 412 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RPS3AP61247 VN1R105P-201ENST00000486595 910 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RPS3AP61247 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.58□□□□□ -1.84
RPS3AP61247 RN7SKP83-201ENST00000516512 178 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 AC060788.1-201ENST00000521318 469 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 AC100870.1-201ENST00000522035 505 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.58□□□□□ -1.84
RPS3AP61247 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.58□□□□□ -1.84
RPS3AP61247 AL355836.1-201ENST00000555951 870 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.58□□□□□ -1.84
RPS3AP61247 AC022968.1-201ENST00000567372 442 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 MIR548AB-201ENST00000584917 84 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 AC093227.2-201ENST00000589357 285 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 BRDTP1-201ENST00000605735 677 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.58□□□□□ -1.84
RPS3AP61247 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.58□□□□□ -1.84
RPS3AP61247 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPS3AP61247 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.58□□□□□ -1.84
RPS3AP61247 CUL1P1-201ENST00000509510 2425 ntBASIC3.58□□□□□ -1.84
RPS3AP61247 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RPS3AP61247 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPS3AP61247 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RPS3AP61247 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPS3AP61247 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RPS3AP61247 U3.4-201ENST00000363352 213 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPS3AP61247 AL391417.1-201ENST00000404100 426 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 HSPE1P8-201ENST00000406997 288 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 FCF1P10-201ENST00000407590 479 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 RPL21P24-201ENST00000413752 448 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 BX842559.1-201ENST00000419615 532 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 AL590383.1-201ENST00000428602 75 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.57□□□□□ -1.84
RPS3AP61247 USP12PX-201ENST00000432383 1057 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 SNRPEP4-201ENST00000435815 279 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.57□□□□□ -1.84
RPS3AP61247 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.57□□□□□ -1.84
RPS3AP61247 MTND2P22-201ENST00000444325 1033 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 RPS20P20-201ENST00000460498 340 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RPS3AP61247 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.57□□□□□ -1.84
RPS3AP61247 MTND4LP31-201ENST00000514859 294 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 RNA5SP179-201ENST00000517284 121 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 AC093331.1-201ENST00000521474 169 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.57□□□□□ -1.84
RPS3AP61247 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.57□□□□□ -1.84
RPS3AP61247 AC022690.1-201ENST00000526681 550 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.57□□□□□ -1.84
RPS3AP61247 AC008011.1-201ENST00000545989 227 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPS3AP61247 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.57□□□□□ -1.84
RPS3AP61247 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.57□□□□□ -1.84
RPS3AP61247 MIR4738-201ENST00000579134 87 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.57□□□□□ -1.84
RPS3AP61247 RNU6-87P-201ENST00000607561 108 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 AC009570.1-201ENST00000609599 745 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 SDR42E1P2-201ENST00000614861 481 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 AC010133.1-201ENST00000615809 842 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms